Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26364	B4galt6	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	18		56386
Gene Ontology	carbohydrate metabolism | galactosyltransferase activity | Golgi apparatus | integral to membrane | magnesium ion binding | manganese ion binding | sphingolipid biosynthesis | transferase activity | transferase activity, transferring glycosyl groups
Human Homolog	B4GALT6[UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TGCACACACA (29) 8.2 0.0082 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GCAAGCACTG (4) 1.6 0.0016 P8 Cb GC TGGAATTTTA (3) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TTTGTACTTT (3) 16.2 0.0162 Cb medulloblastoma CGGGAAAATG (3) 4.6 0.0046 Cb medulloblastoma AGAAGCAAAA (3) 2.3 0.0023 Cb medulloblastoma GCAAGCACTG (4) 2.3 0.0023 Cb medulloblastoma TGCACACACA (29) 2.3 0.0023 Cb medulloblastoma TGTGTGCTTA 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TGCACACACA (29) 9.1 0.0091 P8 GC+1d culture TTTGTACTTT (3) 5.7 0.0057 P8 GC+1d culture AAATTTAAGT (3) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TGCACACACA (29) 16.4 0.0164 P8 GC+SHH+1d culture TTTGTACTTT (3) 8.2 0.0082 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 3T3 fibroblasts TGCACACACA (29) 14 0.014 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex AAATTTAAGT (3) 4.5 0.0045 P1 cortex TGCACACACA (29) 4.5 0.0045 P1 cortex TTTGGACTTT (4) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TTTGTACTTT (3) 5.4 0.0054 Hypothalamus AGAAGCAAAA (3) 1.8 0.0018 Hypothalamus TGCACACACA (29) 1.8 0.0018 Hypothalamus TGTGTGCTTA 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TGCACACACA (29) 5.6 0.0056 E12.5 retina TTTGTACTTT (3) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TGCACACACA (29) 9.1 0.0091 E14.5 retina AAATTTAAGT (3) 1.8 0.0018 E14.5 retina TTTGTACTTT (3) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TGCACACACA (29) 9.1 0.0091 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina AGAAGCAAAA (3) 1.8 0.0018 E16.5 retina GCAAGCACTG (4) 1.8 0.0018 E16.5 retina TGGAATTTTA (3) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TGCACACACA (29) 7.3 0.0073 E18.5 retina TTTGTACTTT (3) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TGCACACACA (29) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TGCACACACA (29) 3.5 0.0035 P2.5 retina AAATTTAAGT (3) 1.8 0.0018 P2.5 retina TTTGGACTTT (4) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina AAAGACAGAA (7) 2 0.002 P4.5 retina CGGGAAAATG (3) 2 0.002 P4.5 retina TGCACACACA (29) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TGCACACACA (29) 11.7 0.0117 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TTTGGACTTT (4) 3.3 0.0033 P6.5 retina TTTGTACTTT (3) 3.3 0.0033 P6.5 retina TGTGTGCTTA 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TGCACACACA (29) 3.7 0.0037 P10.5 crx- retina TTTGTACTTT (3) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TGCACACACA (29) 9.6 0.0096 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AAAGACAGAA (7) 1.9 0.0019 P10.5 crx+ retina TGTGTGCTTA 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TGCACACACA (29) 9.3 0.0093 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal AGAAGCAAAA (3) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TGCACACACA (29) 15.3 0.0153 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AAAGACAGAA (7) 1.9 0.0019 ONL TGGAATTTTA (3) 1.9 0.0019 ONL TGTGTGCTTA 1.9 0.0019