Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.264016
AU014972
expressed sequence AU014972
19
107279
Mm.264016
AW228836
expressed sequence AW228836
19
107367
Mm.264016
5730596K20Rik
RIKEN cDNA 5730596K20 gene
19
109168
Human Homolog
DKFZP564J0863[DKFZP564J0863 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAAAAAAAA (
60
)
17.9
0.0179
P8 Cb GC
CTTCAGGCCA (
5
)
1.6
0.0016
Cb medulloblastoma
TCAAAAAAAA (
60
)
99.4
0.0994
P8 GC+1d culture
TCAAAAAAAA (
60
)
17.1
0.0171
P8 GC+1d culture
TTTCTTTTTG
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TCAAAAAAAA (
60
)
51.5
0.0515
P8 GC+SHH+1d culture
TGCCAGAGCT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CCACACACAC (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
CTTCAGGCCA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GAAAATGGAA
(
9
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTCTTTTTG
(
5
)
1.2
0.0012
3T3 fibroblasts
TCAAAAAAAA (
60
)
7
0.007
3T3 fibroblasts
TGCCAGAGCT
(
3
)
7
0.007
3T3 fibroblasts
CTTCAGGCCA (
5
)
3.5
0.0035
3T3 fibroblasts
TTTCTTTTTG
(
5
)
3.5
0.0035
E15 cortex
TCAAAAAAAA (
60
)
14.8
0.0148
E15 cortex
GAAAATGGAA
(
9
)
4.9
0.0049
P1 cortex
TCAAAAAAAA (
60
)
22.7
0.0227
Hypothalamus
TCAAAAAAAA (
60
)
39.8
0.0398
Hypothalamus
CTTCAGGCCA (
5
)
1.8
0.0018
E12.5 retina
TCAAAAAAAA (
60
)
18.8
0.0188
E14.5 retina
TCAAAAAAAA (
60
)
41.9
0.0419
E14.5 retina
CTTCAGGCCA (
5
)
3.6
0.0036
E14.5 retina
TGCCAGAGCT
(
3
)
1.8
0.0018
E16.5 retina
TCAAAAAAAA (
60
)
18.1
0.0181
E16.5 retina
CTTCAGGCCA (
5
)
3.6
0.0036
E18.5 retina
TCAAAAAAAA (
60
)
49.1
0.0491
E18.5 retina
GAGGCTAAGG
(
3
)
1.8
0.0018
P0.5 retina
TCAAAAAAAA (
60
)
31.4
0.0314
P0.5 retina
TGCCAGAGCT
(
3
)
2
0.002
P2.5 retina
TCAAAAAAAA (
60
)
35.2
0.0352
P2.5 retina
CTTCAGGCCA (
5
)
3.5
0.0035
P2.5 retina
TTTCTTTTTG
(
5
)
3.5
0.0035
P4.5 retina
TCAAAAAAAA (
60
)
37.6
0.0376
P4.5 retina
GAGGCTAAGG
(
3
)
4
0.004
P4.5 retina
TTTCTTTTTG
(
5
)
2
0.002
P6.5 retina
TCAAAAAAAA (
60
)
31.7
0.0317
P6.5 retina
CCACACACAC (
6
)
1.7
0.0017
P6.5 retina
GAAAATGGAA
(
9
)
1.7
0.0017
P6.5 retina
GAGGCTAAGG
(
3
)
1.7
0.0017
P10.5 crx- retina
TCAAAAAAAA (
60
)
14.9
0.0149
P10.5 crx- retina
CCACACACAC (
6
)
1.9
0.0019
P10.5 crx- retina
CTTCAGGCCA (
5
)
1.9
0.0019
P10.5 crx+ retina
TCAAAAAAAA (
60
)
17.3
0.0173
Adult retinal
TCAAAAAAAA (
60
)
20.4
0.0204
Adult retinal
TTTCTTTTTG
(
5
)
1.9
0.0019
ONL
TCAAAAAAAA (
60
)
15.3
0.0153
ONL
CCACACACAC (
6
)
1.9
0.0019
