Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.264266
3110023B02Rik
RIKEN cDNA 3110023B02 gene
11
67291
Human Homolog
MGC16597[similar to RIKEN cDNA 3110023B02]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 89 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
P8 Cb GC
CGGTTGCTGG (
6
)
17.9
0.0179
P8 Cb GC
ATGGCTCACA (
25
)
11.4
0.0114
P8 Cb GC
AGAAATAAAA
(
3
)
8.2
0.0082
P8 Cb GC
AACAAATATA (
2
)
1.6
0.0016
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
Cb medulloblastoma
ATGGCTCACA (
25
)
20.8
0.0208
Cb medulloblastoma
AGAAATAAAA
(
3
)
13.9
0.0139
Cb medulloblastoma
CGGTTGCTGG (
6
)
6.9
0.0069
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+1d culture
ATGGCTCACA (
25
)
33.1
0.0331
P8 GC+1d culture
CGGTTGCTGG (
6
)
20.5
0.0205
P8 GC+1d culture
AGAAATAAAA
(
3
)
3.4
0.0034
P8 GC+1d culture
AGAGCCTGAG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
P8 GC+SHH+1d culture
ATGGCTCACA (
25
)
25.8
0.0258
P8 GC+SHH+1d culture
CGGTTGCTGG (
6
)
18.7
0.0187
P8 GC+SHH+1d culture
AGAAATAAAA
(
3
)
1.2
0.0012
3T3 fibroblasts
ATGGCTCACA (
25
)
31.5
0.0315
3T3 fibroblasts
CGGTTGCTGG (
6
)
10.5
0.0105
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
3T3 fibroblasts
AGAGCCTGAG (
4
)
3.5
0.0035
E15 cortex
CGGTTGCTGG (
6
)
54.4
0.0544
E15 cortex
ATGGCTCACA (
25
)
29.7
0.0297
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
E15 cortex
AGAAATAAAA
(
3
)
4.9
0.0049
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
P1 cortex
ATGGCTCACA (
25
)
13.6
0.0136
P1 cortex
AGAAATAAAA
(
3
)
4.5
0.0045
P1 cortex
CGGTTGCTGG (
6
)
4.5
0.0045
Hypothalamus
ATGGCTCACA (
25
)
43.5
0.0435
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
Hypothalamus
CGGTTGCTGG (
6
)
5.4
0.0054
Hypothalamus
AGAAATAAAA
(
3
)
3.6
0.0036
Hypothalamus
AGAGCCTGAG (
4
)
1.8
0.0018
E12.5 retina
ATGGCTCACA (
25
)
48.8
0.0488
E12.5 retina
CGGTTGCTGG (
6
)
30
0.03
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
AGAAATAAAA
(
3
)
9.4
0.0094
E12.5 retina
AGAGCCTGAG (
4
)
1.9
0.0019
E14.5 retina
ATGGCTCACA (
25
)
47.4
0.0474
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E14.5 retina
CGGTTGCTGG (
6
)
31
0.031
E14.5 retina
AGAAATAAAA
(
3
)
3.6
0.0036
E16.5 retina
ATGGCTCACA (
25
)
58
0.058
E16.5 retina
CGGTTGCTGG (
6
)
36.2
0.0362
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
AGAAATAAAA
(
3
)
9.1
0.0091
E16.5 retina
AGAGCCTGAG (
4
)
3.6
0.0036
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
E18.5 retina
ATGGCTCACA (
25
)
38.2
0.0382
E18.5 retina
AGAAATAAAA
(
3
)
18.2
0.0182
E18.5 retina
CGGTTGCTGG (
6
)
9.1
0.0091
E18.5 retina
AGAGCCTGAG (
4
)
3.6
0.0036
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P0.5 retina
ATGGCTCACA (
25
)
35.3
0.0353
P0.5 retina
CGGTTGCTGG (
6
)
15.7
0.0157
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
ATGGCTCACA (
25
)
31.7
0.0317
P2.5 retina
CGGTTGCTGG (
6
)
22.9
0.0229
P2.5 retina
AGAAATAAAA
(
3
)
1.8
0.0018
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
AGAAATAAAA
(
3
)
25.8
0.0258
P4.5 retina
ATGGCTCACA (
25
)
23.8
0.0238
P4.5 retina
CGGTTGCTGG (
6
)
21.8
0.0218
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
ATGGCTCACA (
25
)
55
0.055
P6.5 retina
AGAAATAAAA
(
3
)
16.7
0.0167
P6.5 retina
CGGTTGCTGG (
6
)
16.7
0.0167
P10.5 crx- retina
ATGGCTCACA (
25
)
44.6
0.0446
P10.5 crx- retina
CGGTTGCTGG (
6
)
40.9
0.0409
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx- retina
AGAAATAAAA
(
3
)
7.4
0.0074
P10.5 crx- retina
AGAGCCTGAG (
4
)
1.9
0.0019
P10.5 crx+ retina
ATGGCTCACA (
25
)
44.2
0.0442
P10.5 crx+ retina
CGGTTGCTGG (
6
)
25
0.025
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
AGAAATAAAA
(
3
)
3.8
0.0038
P10.5 crx+ retina
AACAAATATA (
2
)
1.9
0.0019
P10.5 crx+ retina
AGAGCCTGAG (
4
)
1.9
0.0019
Adult retinal
ATGGCTCACA (
25
)
33.3
0.0333
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
Adult retinal
CGGTTGCTGG (
6
)
13
0.013
Adult retinal
AGAAATAAAA
(
3
)
1.9
0.0019
ONL
ATGGCTCACA (
25
)
49.8
0.0498
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
CGGTTGCTGG (
6
)
15.3
0.0153
ONL
AGAAATAAAA
(
3
)
5.7
0.0057
ONL
AGAGCCTGAG (
4
)
1.9
0.0019
