Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.26479
Nedd10
neural precursor cell expressed, developmentally down-regulated gene 10
4
17998
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGAAAAAAAA (
81
)
27.7
0.0277
P8 Cb GC
GTGTTTTAAA (
3
)
1.6
0.0016
P8 Cb GC
TCAGTGTTGT
(
2
)
1.6
0.0016
Cb medulloblastoma
TGAAAAAAAA (
81
)
78.6
0.0786
Cb medulloblastoma
GTGTTTTAAA (
3
)
2.3
0.0023
P8 GC+1d culture
TGAAAAAAAA (
81
)
26.3
0.0263
P8 GC+1d culture
GTGTTTTAAA (
3
)
10.3
0.0103
P8 GC+1d culture
GAAGAGGGGG (
4
)
3.4
0.0034
P8 GC+1d culture
TCAGTGTTGT
(
2
)
3.4
0.0034
P8 GC+1d culture
AAGTATTTTC
(
3
)
2.3
0.0023
P8 GC+1d culture
AGGAGGGCTT (
3
)
1.1
0.0011
P8 GC+1d culture
TTGAGAATGG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGAAAAAAAA (
81
)
57.4
0.0574
P8 GC+SHH+1d culture
GTGTTTTAAA (
3
)
7
0.007
P8 GC+SHH+1d culture
GAAGAGGGGG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTGTGTCTG (
5
)
1.2
0.0012
3T3 fibroblasts
GTGTTTTAAA (
3
)
10.5
0.0105
3T3 fibroblasts
TGAAAAAAAA (
81
)
7
0.007
E15 cortex
TGAAAAAAAA (
81
)
29.7
0.0297
E15 cortex
CCTTTCCTTG (
4
)
4.9
0.0049
E15 cortex
TTTGTGTCTG (
5
)
4.9
0.0049
P1 cortex
TGAAAAAAAA (
81
)
4.5
0.0045
Hypothalamus
TGAAAAAAAA (
81
)
36.2
0.0362
Hypothalamus
GTGTTTTAAA (
3
)
3.6
0.0036
Hypothalamus
TTTTCACTGT (
4
)
1.8
0.0018
E12.5 retina
TGAAAAAAAA (
81
)
31.9
0.0319
E12.5 retina
GTGTTTTAAA (
3
)
1.9
0.0019
E12.5 retina
TCAGTGTTGT
(
2
)
1.9
0.0019
E14.5 retina
TGAAAAAAAA (
81
)
49.2
0.0492
E14.5 retina
GTGTTTTAAA (
3
)
5.5
0.0055
E14.5 retina
TCAGTGTTGT
(
2
)
1.8
0.0018
E14.5 retina
TTTTCACTGT (
4
)
1.8
0.0018
E16.5 retina
TGAAAAAAAA (
81
)
16.3
0.0163
E16.5 retina
GTGTTTTAAA (
3
)
1.8
0.0018
E16.5 retina
TTGAGAATGG
(
4
)
1.8
0.0018
E18.5 retina
TGAAAAAAAA (
81
)
74.6
0.0746
E18.5 retina
GTGTTTTAAA (
3
)
5.5
0.0055
E18.5 retina
TCAGTGTTGT
(
2
)
5.5
0.0055
E18.5 retina
TTTGTGTCTG (
5
)
3.6
0.0036
E18.5 retina
AAGTATTTTC
(
3
)
1.8
0.0018
E18.5 retina
TTTTCACTGT (
4
)
1.8
0.0018
P0.5 retina
TGAAAAAAAA (
81
)
15.7
0.0157
P0.5 retina
TCAGTGTTGT
(
2
)
7.9
0.0079
P0.5 retina
TTTGTGTCTG (
5
)
3.9
0.0039
P0.5 retina
GTGTTTTAAA (
3
)
2
0.002
P2.5 retina
TGAAAAAAAA (
81
)
42.2
0.0422
P2.5 retina
GTGTTTTAAA (
3
)
3.5
0.0035
P2.5 retina
TCAGTGTTGT
(
2
)
3.5
0.0035
P2.5 retina
AGGAGGGCTT (
3
)
1.8
0.0018
P2.5 retina
TTTTCACTGT (
4
)
1.8
0.0018
P4.5 retina
TGAAAAAAAA (
81
)
43.6
0.0436
P4.5 retina
TTTGTGTCTG (
5
)
2
0.002
P6.5 retina
TGAAAAAAAA (
81
)
33.3
0.0333
P6.5 retina
AGGAGGGCTT (
3
)
3.3
0.0033
P6.5 retina
AAGTATTTTC
(
3
)
1.7
0.0017
P6.5 retina
TTGAGAATGG
(
4
)
1.7
0.0017
P10.5 crx- retina
TGAAAAAAAA (
81
)
9.3
0.0093
P10.5 crx- retina
CCTTTCCTTG (
4
)
3.7
0.0037
P10.5 crx- retina
GTGTTTTAAA (
3
)
1.9
0.0019
P10.5 crx- retina
TCAGTGTTGT
(
2
)
1.9
0.0019
P10.5 crx- retina
TTTGTGTCTG (
5
)
1.9
0.0019
P10.5 crx- retina
TTTTCACTGT (
4
)
1.9
0.0019
P10.5 crx+ retina
TGAAAAAAAA (
81
)
19.2
0.0192
P10.5 crx+ retina
TCAGTGTTGT
(
2
)
5.8
0.0058
P10.5 crx+ retina
GAAGAGGGGG (
4
)
1.9
0.0019
P10.5 crx+ retina
GTGTTTTAAA (
3
)
1.9
0.0019
Adult retinal
TGAAAAAAAA (
81
)
13
0.013
ONL
TGAAAAAAAA (
81
)
19.2
0.0192
ONL
TCAGTGTTGT
(
2
)
3.8
0.0038
ONL
TTTTCACTGT (
4
)
3.8
0.0038
