Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.264984
Slc35a5
solute carrier family 35, member A5
16
16 29.9 cM
74102
Mm.264984
D730043G07Rik
RIKEN cDNA D730043G07 gene
16
320934
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
ACTGGTGTAC (
3
)
1.6
0.0016
P8 Cb GC
ATGCCTTCTT (
6
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
ATGCCTTCTT (
6
)
9.2
0.0092
Cb medulloblastoma
AAATTGGCAG (
6
)
4.6
0.0046
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ACTGGTGTAC (
3
)
4.6
0.0046
P8 GC+1d culture
AAATTGGCAG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
ATGCCTTCTT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
ACTGGTGTAC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
AGCTTTTAAA (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TATTTATATA
(
4
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
ACTGGTGTAC (
3
)
7
0.007
3T3 fibroblasts
AAATTGGCAG (
6
)
3.5
0.0035
3T3 fibroblasts
ATGCCTTCTT (
6
)
3.5
0.0035
3T3 fibroblasts
GGAACCTTGG (
5
)
3.5
0.0035
3T3 fibroblasts
TGGAAGCCCT
(
5
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AAATTGGCAG (
6
)
9.9
0.0099
E15 cortex
TGGAAGCCCT
(
5
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
ACTGGTGTAC (
3
)
9.1
0.0091
P1 cortex
TATTTATATA
(
4
)
9.1
0.0091
P1 cortex
ATGCCTTCTT (
6
)
4.5
0.0045
P1 cortex
TGGAAGCCCT
(
5
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
ATGCCTTCTT (
6
)
7.2
0.0072
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
ATGCCTTCTT (
6
)
3.8
0.0038
E12.5 retina
GGAACCTTGG (
5
)
3.8
0.0038
E12.5 retina
AGCTTTTAAA (
7
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
ACTGGTGTAC (
3
)
3.6
0.0036
E14.5 retina
ATGCCTTCTT (
6
)
3.6
0.0036
E14.5 retina
GGAACCTTGG (
5
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
ATGCCTTCTT (
6
)
7.2
0.0072
E16.5 retina
ACTGGTGTAC (
3
)
3.6
0.0036
E16.5 retina
GGAACCTTGG (
5
)
1.8
0.0018
E16.5 retina
TATTTATATA
(
4
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
ATGCCTTCTT (
6
)
3.6
0.0036
E18.5 retina
GGAACCTTGG (
5
)
1.8
0.0018
E18.5 retina
TATTTATATA
(
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AGCTTTTAAA (
7
)
2
0.002
P0.5 retina
TGGAAGCCCT
(
5
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
ATGCCTTCTT (
6
)
3.5
0.0035
P2.5 retina
AGCTTTTAAA (
7
)
1.8
0.0018
P2.5 retina
GGAACCTTGG (
5
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
ACTGGTGTAC (
3
)
2
0.002
P4.5 retina
ATGCCTTCTT (
6
)
2
0.002
P4.5 retina
GGAACCTTGG (
5
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GGAACCTTGG (
5
)
3.3
0.0033
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AAATTGGCAG (
6
)
5.6
0.0056
P10.5 crx- retina
ATGCCTTCTT (
6
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TATTTATATA
(
4
)
5.8
0.0058
P10.5 crx+ retina
ACTGGTGTAC (
3
)
1.9
0.0019
P10.5 crx+ retina
ATGCCTTCTT (
6
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AGCTTTTAAA (
7
)
1.9
0.0019
Adult retinal
ATGCCTTCTT (
6
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
ATGCCTTCTT (
6
)
7.7
0.0077
ONL
ACTGGTGTAC (
3
)
1.9
0.0019
ONL
GGAACCTTGG (
5
)
1.9
0.0019
