Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.265347	Anxa6	annexin A6	11	11 29.5 cM	11749
Gene Ontology	calcium ion binding | calcium ion transport | calcium-dependent phospholipid binding | regulation of muscle contraction
Human Homolog	ANXA6[annexin A6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGCTTTGC (6) 11.4 0.0114 P8 Cb GC GTGGCACACG (29) 4.9 0.0049 P8 Cb GC GTGATGGTGT (2) 3.3 0.0033 P8 Cb GC AAGGGTGCTG (4) 1.6 0.0016 P8 Cb GC GCTAAGGGGC (2) 1.6 0.0016 P8 Cb GC TCATCAGAAG (4) 1.6 0.0016 Cb medulloblastoma GAGGCTTTGC (6) 4.6 0.0046 Cb medulloblastoma GCTAAGGGGC (2) 4.6 0.0046 Cb medulloblastoma AAGGGTGCTG (4) 2.3 0.0023 Cb medulloblastoma GAACACTTTT (8) 2.3 0.0023 Cb medulloblastoma GTGGCACACG (29) 2.3 0.0023 P8 GC+1d culture GCTAAGGGGC (2) 5.7 0.0057 P8 GC+1d culture AAGGGTGCTG (4) 4.6 0.0046 P8 GC+1d culture GCACAGATGA (4) 1.1 0.0011 P8 GC+1d culture GTGGCACACG (29) 1.1 0.0011 P8 GC+SHH+1d culture GCTAAGGGGC (2) 9.4 0.0094 P8 GC+SHH+1d culture GTGGCACACG (29) 7 0.007 P8 GC+SHH+1d culture GAGGCTTTGC (6) 3.5 0.0035 P8 GC+SHH+1d culture AAGGGTGCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture GCGGCACAGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TCATCAGAAG (4) 1.2 0.0012 3T3 fibroblasts GAGGCTTTGC (6) 77.1 0.0771 3T3 fibroblasts GTGGCACACG (29) 35 0.035 3T3 fibroblasts AAGGGTGCTG (4) 24.5 0.0245 3T3 fibroblasts GCTAAGGGGC (2) 10.5 0.0105 3T3 fibroblasts GCGGCACAGA (4) 3.5 0.0035 E15 cortex GAGGCTTTGC (6) 84.1 0.0841 E15 cortex GTGGCACACG (29) 69.3 0.0693 P1 cortex GAGGCTTTGC (6) 18.2 0.0182 P1 cortex GAACACTTTT (8) 9.1 0.0091 P1 cortex GTGGCACACG (29) 9.1 0.0091 P1 cortex GCTAAGGGGC (2) 4.5 0.0045 Hypothalamus GAGGCTTTGC (6) 10.9 0.0109 Hypothalamus GCTAAGGGGC (2) 3.6 0.0036 Hypothalamus AAGGGTGCTG (4) 1.8 0.0018 Hypothalamus GAACACTTTT (8) 1.8 0.0018 Hypothalamus GCACAGATGA (4) 1.8 0.0018 Hypothalamus GCGGCACAGA (4) 1.8 0.0018 E12.5 retina GTGGCACACG (29) 13.1 0.0131 E12.5 retina GAGGCTTTGC (6) 5.6 0.0056 E12.5 retina AAGGGTGCTG (4) 1.9 0.0019 E12.5 retina GCGGCACAGA (4) 1.9 0.0019 E14.5 retina GTGGCACACG (29) 18.2 0.0182 E14.5 retina AAGGGGTTGG (4) 3.6 0.0036 E14.5 retina GAGGCTTTGC (6) 3.6 0.0036 E14.5 retina GGAGACACTT (4) 1.8 0.0018 E16.5 retina GTGGCACACG (29) 5.4 0.0054 E16.5 retina GAGGCTTTGC (6) 3.6 0.0036 E16.5 retina GCACAGATGA (4) 3.6 0.0036 E16.5 retina GAACACTTTT (8) 1.8 0.0018 E16.5 retina GTGATGGTGT (2) 1.8 0.0018 E18.5 retina AAGGTGCTGG (6) 3.6 0.0036 E18.5 retina GTGGCACACG (29) 3.6 0.0036 E18.5 retina GAGGCTTTGC (6) 1.8 0.0018 E18.5 retina GCGGCACAGA (4) 1.8 0.0018 P0.5 retina GTGGCACACG (29) 5.9 0.0059 P0.5 retina GAGGCTTTGC (6) 3.9 0.0039 P0.5 retina GCGGCACAGA (4) 3.9 0.0039 P0.5 retina GAACACTTTT (8) 2 0.002 P0.5 retina GCACAGATGA (4) 2 0.002 P2.5 retina GTGGCACACG (29) 8.8 0.0088 P2.5 retina AAGGGTGCTG (4) 1.8 0.0018 P2.5 retina GCTAAGGGGC (2) 1.8 0.0018 P4.5 retina GTGGCACACG (29) 13.9 0.0139 P4.5 retina GAGGCTTTGC (6) 2 0.002 P6.5 retina GTGGCACACG (29) 6.7 0.0067 P6.5 retina AAGGGTGCTG (4) 1.7 0.0017 P6.5 retina GCACAGATGA (4) 1.7 0.0017 P6.5 retina GCTAAGGGGC (2) 1.7 0.0017 P6.5 retina TCATCAGAAG (4) 1.7 0.0017 P10.5 crx- retina GAGGCTTTGC (6) 9.3 0.0093 P10.5 crx- retina GAACACTTTT (8) 5.6 0.0056 P10.5 crx- retina AAGGTGCTGG (6) 3.7 0.0037 P10.5 crx- retina GGAGACACTT (4) 1.9 0.0019 P10.5 crx- retina GTGGCACACG (29) 1.9 0.0019 P10.5 crx+ retina GTGGCACACG (29) 9.6 0.0096 P10.5 crx+ retina AAGGTGCTGG (6) 3.8 0.0038 P10.5 crx+ retina GAACACTTTT (8) 1.9 0.0019 P10.5 crx+ retina GCTAAGGGGC (2) 1.9 0.0019 P10.5 crx+ retina TCATCAGAAG (4) 1.9 0.0019 Adult retinal GTGGCACACG (29) 13 0.013 Adult retinal GAGGCTTTGC (6) 5.6 0.0056 Adult retinal GCGGCACAGA (4) 3.7 0.0037 Adult retinal GCTAAGGGGC (2) 3.7 0.0037 Adult retinal GGAGACACTT (4) 1.9 0.0019 ONL GTGGCACACG (29) 7.7 0.0077 ONL GCACAGATGA (4) 3.8 0.0038 ONL TCATCAGAAG (4) 3.8 0.0038 ONL AAGGGGTTGG (4) 1.9 0.0019 ONL AAGGTGCTGG (6) 1.9 0.0019