Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.265716	Fgfr1	fibroblast growth factor receptor 1	8	8 10.0 cM (8 10.0 cM)	14182
Gene Ontology	ATP binding | brain development | extracellular space | fibroblast growth factor receptor activity | inner ear morphogenesis | integral to membrane | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | salivary gland morphogenesis | signal transduction | transferase activity
Human Homolog	FGFR1[fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGAGACGC (2) 4.9 0.0049 P8 Cb GC TCTTTTTAAA (6) 3.3 0.0033 P8 Cb GC GTGGGAGGAA (5) 1.6 0.0016 Cb medulloblastoma GGGGAGACGC (2) 13.9 0.0139 Cb medulloblastoma GTGGGAGGAA (5) 4.6 0.0046 Cb medulloblastoma TACTAGCACA (3) 4.6 0.0046 Cb medulloblastoma GAGGAGACGC (4) 2.3 0.0023 Cb medulloblastoma TAAATATATA (4) 2.3 0.0023 P8 GC+1d culture GGGGAGACGC (2) 8 0.008 P8 GC+1d culture GTGGGAGGAA (5) 6.8 0.0068 P8 GC+1d culture CTGGCCTGGA (2) 4.6 0.0046 P8 GC+1d culture GGAAAATCCC (9) 2.3 0.0023 P8 GC+1d culture AGCCGTTACC 1.1 0.0011 P8 GC+1d culture GAGGAGACGC (4) 1.1 0.0011 P8 GC+1d culture TCTTTTTAAA (6) 1.1 0.0011 P8 GC+1d culture TGTAAGGTGT (2) 1.1 0.0011 P8 GC+SHH+1d culture GGGGAGACGC (2) 7 0.007 P8 GC+SHH+1d culture TCTTTTTAAA (6) 5.9 0.0059 P8 GC+SHH+1d culture GTGGGAGGAA (5) 4.7 0.0047 P8 GC+SHH+1d culture GAGTATCTTG (9) 2.3 0.0023 P8 GC+SHH+1d culture AACAGTGTGC (10) 1.2 0.0012 P8 GC+SHH+1d culture CTGGCCTGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAGACGC (4) 1.2 0.0012 P8 GC+SHH+1d culture GGAAAATCCC (9) 1.2 0.0012 P8 GC+SHH+1d culture TGTAAGGTGT (2) 1.2 0.0012 3T3 fibroblasts GGGGAGACGC (2) 28 0.028 3T3 fibroblasts GTGGGAGGAA (5) 7 0.007 3T3 fibroblasts CTGGCCTGGA (2) 3.5 0.0035 3T3 fibroblasts GAGGAGACGC (4) 3.5 0.0035 E15 cortex GGGGAGACGC (2) 24.7 0.0247 E15 cortex GAGGAGACGC (4) 4.9 0.0049 E15 cortex GGAAAATCCC (9) 4.9 0.0049 P1 cortex GGAAAATCCC (9) 9.1 0.0091 P1 cortex TAAATATATA (4) 9.1 0.0091 P1 cortex GTGGGAGGAA (5) 4.5 0.0045 P1 cortex TGTAGGTGTA 4.5 0.0045 Hypothalamus GGGGAGACGC (2) 5.4 0.0054 Hypothalamus TAAATATATA (4) 3.6 0.0036 Hypothalamus GAGGAGACGC (4) 1.8 0.0018 Hypothalamus GAGTATCTTG (9) 1.8 0.0018 Hypothalamus GTGGGAGGAA (5) 1.8 0.0018 Hypothalamus TACTAGCACA (3) 1.8 0.0018 E12.5 retina GTGGGAGGAA (5) 18.8 0.0188 E12.5 retina GAGTATCTTG (9) 3.8 0.0038 E12.5 retina AACAGTGTGC (10) 1.9 0.0019 E12.5 retina TGTAGGTGTA 1.9 0.0019 E14.5 retina GTGGGAGGAA (5) 7.3 0.0073 E14.5 retina TGTAAGGTGT (2) 7.3 0.0073 E14.5 retina GGGGAGACGC (2) 5.5 0.0055 E14.5 retina AGCCGTTACC 3.6 0.0036 E16.5 retina GTGGGAGGAA (5) 10.9 0.0109 E16.5 retina GAGTATCTTG (9) 3.6 0.0036 E16.5 retina GGGGAGACGC (2) 3.6 0.0036 E16.5 retina TGTAAGGTGT (2) 3.6 0.0036 E16.5 retina CTGGCCTGGA (2) 1.8 0.0018 E16.5 retina TAACTGTCAA (2) 1.8 0.0018 E16.5 retina TCTTTTTAAA (6) 1.8 0.0018 E16.5 retina TGTAGGTGTA 1.8 0.0018 E18.5 retina GGGGAGACGC (2) 9.1 0.0091 E18.5 retina TGTAAGGTGT (2) 1.8 0.0018 E18.5 retina TGTAGGTGTA 1.8 0.0018 P0.5 retina GTGGGAGGAA (5) 9.8 0.0098 P0.5 retina GGGGAGACGC (2) 3.9 0.0039 P0.5 retina TGTAAGGTGT (2) 3.9 0.0039 P0.5 retina CTGGCCTGGA (2) 2 0.002 P0.5 retina GAGGAGACGC (4) 2 0.002 P0.5 retina GAGTATCTTG (9) 2 0.002 P0.5 retina TGTAGGTGTA 2 0.002 P2.5 retina GGGGAGACGC (2) 8.8 0.0088 P2.5 retina GTGGGAGGAA (5) 7 0.007 P2.5 retina CGGTGGCCCG (2) 1.8 0.0018 P2.5 retina GGAAAATCCC (9) 1.8 0.0018 P2.5 retina GTGGGTGGAA (5) 1.8 0.0018 P2.5 retina TAAATATATA (4) 1.8 0.0018 P2.5 retina TGTAGGTGTA 1.8 0.0018 P4.5 retina GTGGGAGGAA (5) 7.9 0.0079 P4.5 retina GGGGAGACGC (2) 5.9 0.0059 P4.5 retina GAGTATCTTG (9) 4 0.004 P4.5 retina CTGGCCTGGA (2) 2 0.002 P4.5 retina GTGGGTGGAA (5) 2 0.002 P4.5 retina TAAATATATA (4) 2 0.002 P4.5 retina TAACTGTCAA (2) 2 0.002 P4.5 retina TGTAAGGTGT (2) 2 0.002 P6.5 retina GTGGGAGGAA (5) 13.3 0.0133 P6.5 retina GAGTATCTTG (9) 5 0.005 P6.5 retina GGGGAGACGC (2) 3.3 0.0033 P6.5 retina CTGGCCTGGA (2) 1.7 0.0017 P6.5 retina GGAAAATCCC (9) 1.7 0.0017 P10.5 crx- retina GTGGGAGGAA (5) 3.7 0.0037 P10.5 crx- retina GAGTATCTTG (9) 1.9 0.0019 P10.5 crx- retina GGGGAGACGC (2) 1.9 0.0019 P10.5 crx- retina TAACTGTCAA (2) 1.9 0.0019 P10.5 crx- retina TGTAAGGTGT (2) 1.9 0.0019 P10.5 crx+ retina GTGGGAGGAA (5) 7.7 0.0077 P10.5 crx+ retina AACAGTGTGC (10) 1.9 0.0019 P10.5 crx+ retina GAGGAGACGC (4) 1.9 0.0019 P10.5 crx+ retina GTGGGTGGAA (5) 1.9 0.0019 P10.5 crx+ retina TGTAGGTGTA 1.9 0.0019 Adult retinal CGGTGGCCCG (2) 3.7 0.0037 Adult retinal GTGGGAGGAA (5) 3.7 0.0037 Adult retinal GGAAAATCCC (9) 1.9 0.0019 Adult retinal GGGGAGACGC (2) 1.9 0.0019 ONL CGGTGGCCCG (2) 1.9 0.0019 ONL GTGGGAGGAA (5) 1.9 0.0019