Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.265792
1110067I12Rik
RIKEN cDNA 1110067I12 gene
19
68852
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 62 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
GCAGCTCACA (
24
)
8.2
0.0082
P8 Cb GC
CGCCACCACC
(
12
)
6.5
0.0065
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
CGCCACCACC
(
12
)
6.9
0.0069
Cb medulloblastoma
GCAGCTCACA (
24
)
6.9
0.0069
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GCAGCTCACA (
24
)
10.3
0.0103
P8 GC+1d culture
CGCCACCACC
(
12
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GCAGCTCACA (
24
)
10.5
0.0105
P8 GC+SHH+1d culture
CGCCACCACC
(
12
)
5.9
0.0059
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GCAGCTCACA (
24
)
14
0.014
3T3 fibroblasts
CGCCACCACC
(
12
)
7
0.007
3T3 fibroblasts
TTGGGCTCTC
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
GCAGCTCACA (
24
)
24.7
0.0247
E15 cortex
CGCCACCACC
(
12
)
14.8
0.0148
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
CGCCACCACC
(
12
)
4.5
0.0045
P1 cortex
GCAGCTCACA (
24
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
GCAGCTCACA (
24
)
5.4
0.0054
Hypothalamus
CGCCACCACC
(
12
)
3.6
0.0036
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
GCAGCTCACA (
24
)
9.4
0.0094
E12.5 retina
CGCCACCACC
(
12
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
GCAGCTCACA (
24
)
40.1
0.0401
E14.5 retina
CGCCACCACC
(
12
)
3.6
0.0036
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
GCAGCTCACA (
24
)
23.5
0.0235
E16.5 retina
CGCCACCACC
(
12
)
3.6
0.0036
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
GCAGCTCACA (
24
)
14.6
0.0146
E18.5 retina
CGCCACCACC
(
12
)
10.9
0.0109
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GCAGCTCACA (
24
)
15.7
0.0157
P0.5 retina
CGCCACCACC
(
12
)
5.9
0.0059
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
CGCCACCACC
(
12
)
10.6
0.0106
P2.5 retina
GCAGCTCACA (
24
)
7
0.007
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
CGCCACCACC
(
12
)
7.9
0.0079
P4.5 retina
GCAGCTCACA (
24
)
5.9
0.0059
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
GCAGCTCACA (
24
)
15
0.015
P6.5 retina
CGCCACCACC
(
12
)
8.3
0.0083
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GCAGCTCACA (
24
)
24.2
0.0242
P10.5 crx- retina
CGCCACCACC
(
12
)
1.9
0.0019
P10.5 crx- retina
TTGGGCTCTC
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
GCAGCTCACA (
24
)
17.3
0.0173
P10.5 crx+ retina
TTGGGCTCTC
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
GCAGCTCACA (
24
)
18.5
0.0185
Adult retinal
CGCCACCACC
(
12
)
9.3
0.0093
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
GCAGCTCACA (
24
)
7.7
0.0077
ONL
CGCCACCACC
(
12
)
1.9
0.0019
