Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.26612
Pigm
phosphatidylinositol glycan, class M
1
1 94.0 cM
67556
Mm.26612
2810449G22Rik
RIKEN cDNA 2810449G22 gene
1
72773
Mm.26612
C920011G20Rik
RIKEN cDNA C920011G20 gene
1
319964
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTGCTTGCC (
5
)
11.4
0.0114
P8 Cb GC
CCTAGTGTGG
(
6
)
3.3
0.0033
Cb medulloblastoma
ACTGCTTGCC (
5
)
6.9
0.0069
Cb medulloblastoma
GGTCTCTGAG
(
6
)
4.6
0.0046
Cb medulloblastoma
AGTGCTGCGT
(
4
)
2.3
0.0023
Cb medulloblastoma
GTCCATCCTT
(
3
)
2.3
0.0023
Cb medulloblastoma
TATTTGTTTT
(
4
)
2.3
0.0023
P8 GC+1d culture
ACTGCTTGCC (
5
)
10.3
0.0103
P8 GC+1d culture
AGTGCTGCGT
(
4
)
2.3
0.0023
P8 GC+1d culture
CCTAGTGTGG
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
ACTGCTTGCC (
5
)
5.9
0.0059
P8 GC+SHH+1d culture
AGTGCTGCGT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GAACTGTTAA (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TATTTGTTTT
(
4
)
1.2
0.0012
3T3 fibroblasts
ACTGCTTGCC (
5
)
17.5
0.0175
3T3 fibroblasts
AGTGCTGCGT
(
4
)
3.5
0.0035
E15 cortex
ACTGCTTGCC (
5
)
9.9
0.0099
P1 cortex
ACTGCTTGCC (
5
)
9.1
0.0091
Hypothalamus
ACTGCTTGCC (
5
)
7.2
0.0072
Hypothalamus
GAACTGTTAA (
3
)
1.8
0.0018
E12.5 retina
ACTGCTTGCC (
5
)
13.1
0.0131
E12.5 retina
AGTGCTGCGT
(
4
)
1.9
0.0019
E14.5 retina
ACTGCTTGCC (
5
)
12.8
0.0128
E14.5 retina
GTCCATCCTT
(
3
)
7.3
0.0073
E14.5 retina
TATTTGTTTT
(
4
)
1.8
0.0018
E16.5 retina
ACTGCTTGCC (
5
)
16.3
0.0163
E16.5 retina
CCTAGTGTGG
(
6
)
1.8
0.0018
E18.5 retina
ACTGCTTGCC (
5
)
3.6
0.0036
P0.5 retina
ACTGCTTGCC (
5
)
29.4
0.0294
P2.5 retina
ACTGCTTGCC (
5
)
14.1
0.0141
P4.5 retina
ACTGCTTGCC (
5
)
15.9
0.0159
P6.5 retina
ACTGCTTGCC (
5
)
26.7
0.0267
P6.5 retina
GAACTGTTAA (
3
)
1.7
0.0017
P10.5 crx- retina
ACTGCTTGCC (
5
)
55.7
0.0557
P10.5 crx- retina
TATTTGTTTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
ACTGCTTGCC (
5
)
17.3
0.0173
Adult retinal
ACTGCTTGCC (
5
)
38.9
0.0389
Adult retinal
GGTCTCTGAG
(
6
)
1.9
0.0019
ONL
ACTGCTTGCC (
5
)
7.7
0.0077
ONL
AGTGCTGCGT
(
4
)
3.8
0.0038
ONL
GAACTGTTAA (
3
)
1.9
0.0019
