Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.266704	D4Ertd429e	DNA segment, Chr 4, ERATO Doi 429, expressed	4	4 76.4 cM	52277
Mm.266704	AV028368	expressed sequence AV028368	4		230917
Human Homolog	LOC199953[similar to AV028368 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAGCAGC (2) AGTCCAGCTG (2) GAGTCCTGAC (3) 11.4 0.0114 Cb medulloblastoma AAGCAGCAGC (2) GAGTCCTGAC (3) GAGTTCCTGA (2) TTTTGAATGC (2) 30 0.03 P8 GC+1d culture AAGCAGCAGC (2) AGTCCAGCTG (2) GAGTTCCTGA (2) TTTTGAATGC (2) 13.6 0.0136 P8 GC+SHH+1d culture AAGCAGCAGC (2) AGGGAGGAGG GAGTTCCTGA (2) GGGAAGGGAA (4) 11.8 0.0118 3T3 fibroblasts AAGCAGCAGC (2) 14 0.014 E15 cortex AAGCAGCAGC (2) AGTCCAGCTG (2) GGGAAAGGGG 44.5 0.0445 P1 cortex AAGCAGCAGC (2) AGTCCAGCTG (2) 22.7 0.0227 Hypothalamus AAGCAGCAGC (2) GAGTTCCTGA (2) TGGGGTGGGG (2) TTTTGAATGC (2) 16.2 0.0162 E12.5 retina AAGCAGCAGC (2) GGGAAAGGGG GGGAAGGGAA (4) TTTTGAATGC (2) 24.5 0.0245 E14.5 retina AAGCAGCAGC (2) AGGGAGGAGG 3.6 0.0036 E16.5 retina AAGCAGCAGC (2) GGGAAAGGGG TTTTGAATGC (2) 16.3 0.0163 E18.5 retina AAGCAGCAGC (2) 5.5 0.0055 P0.5 retina AAGCAGCAGC (2) AGGGAGGAGG GAGTCCTGAC (3) TTTTGAATGC (2) 19.7 0.0197 P2.5 retina AAGCAGCAGC (2) AGTCCAGCTG (2) GAGTCCTGAC (3) GGGAAGGGAA (4) TTTTGAATGC (2) 28.2 0.0282 P4.5 retina GAGTCCTGAC (3) 5.9 0.0059 P6.5 retina AAGCAGCAGC (2) AGTCCAGCTG (2) GAGTTCCTGA (2) GGGAAGGGAA (4) TGCCTGTAGG TTTTGAAATG TTTTGAATGC (2) 18.4 0.0184 P10.5 crx- retina AAGCAGCAGC (2) AGTCCAGCTG (2) GAGTCCTGAC (3) TGCCTGTAGG TGGGGTGGGG (2) TTTTGAATGC (2) 31.7 0.0317 P10.5 crx+ retina AAGCAGCAGC (2) GAGTCCTGAC (3) TGCCTGTAGG TTTTGAAATG 15.3 0.0153 Adult retinal AAGCAGCAGC (2) GAGTCCTGAC (3) TTTTGAATGC (2) 11.2 0.0112 ONL AAGCAGCAGC (2) GGGAAGGGAA (4) TGGGGTGGGG (2) TTTTGAATGC (2) 13.3 0.0133