Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.266867	Pck1	phosphoenolpyruvate carboxykinase 1, cytosolic	2	2 103.0 cM	18534
Gene Ontology	carboxy-lyase activity | gluconeogenesis | glycerol biosynthesis from pyruvate | GTP binding | kinase activity | lipid metabolism | lyase activity | phosphoenolpyruvate carboxykinase (GTP) activity | phosphoenolpyruvate carboxykinase activity
Human Homolog	PCK1[phosphoenolpyruvate carboxykinase 1 (soluble)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTCGGATGC TACACACACA (2) TGTGTGTGTG (2) TTGCTTTGTT (3) TTGCTTTTGG 65.2 0.0652 Cb medulloblastoma ACTCGGATGC CAGAAACAGA CTCACACAGA (2) GCCACGTATA GGGGGGGGGG TACACACACA (2) TGTGTGTGTG (2) TTGCTTTTGG 69.3 0.0693 P8 GC+1d culture ACTCGGATGC CAGGAGGAGG (2) GAAAGGACAG (2) GCCACGTATA GGGGGGGGGG TCCAGGGTCA (2) TGTGTGTGTG (2) TTGCTTTTGG 67.3 0.0673 P8 GC+SHH+1d culture ACTCGGATGC GCCACGTATA GGGGGGGGGG TCCAGGGTCA (2) TGCCCATCCC (2) TGTGTGTGTG (2) TTGCTTTTGG 67.8 0.0678 3T3 fibroblasts ACTCGGATGC GGGGGGGGGG TGTGTGTGTG (2) 42 0.042 E15 cortex ACTCGGATGC CAGAAACAGA GGGGGGGGGG TGTGAGTGTG TTGCTTTGTT (3) TTGCTTTTGG 54.2 0.0542 P1 cortex ACTCGGATGC GCCACGTATA TGTGTGTGTG (2) TTGCTTTTGG 40.8 0.0408 Hypothalamus ACTCGGATGC GAAAGGACAG (2) GGGGGGGGGG TACACACACA (2) TGTGTGTGTG (2) TTGCTTTTGG 67 0.067 E12.5 retina ACTCGGATGC CAGGAGGAGG (2) GCCACGTATA TACACACACA (2) TGTGTGTGTG (2) TTGCTTTTGG 73.3 0.0733 E14.5 retina ACTCGGATGC GCCACGTATA TACACACACA (2) TGCCCATCCC (2) TGTGTGTGTG (2) TTGCTTTTGG 87.5 0.0875 E16.5 retina ACTCGGATGC GCCACGTATA GGGGCACTGG TACACACACA (2) TGCCCATCCC (2) TGTGTGTGTG (2) TTGCTTTGTT (3) TTGCTTTTGG 101.3 0.1013 E18.5 retina ACTCGGATGC GAAAGGACAG (2) GCCACGTATA TACACACACA (2) TGTGAGTGTG TGTGTGTGTG (2) TTGCTTTTGG 78.2 0.0782 P0.5 retina ACTCGGATGC GCCACGTATA TACACACACA (2) TGTGTGTGTG (2) TTGCTTTGTT (3) TTGCTTTTGG 45.3 0.0453 P2.5 retina ACTCGGATGC GCCACGTATA GGGGGGGGGG TGTGTGTGTG (2) TTGCTTTTGG 82.7 0.0827 P4.5 retina ACTCGGATGC CAGAAACAGA GAAAGGACAG (2) GCCACGTATA GGGGGGGGGG TACACACACA (2) TGTGTGTGTG (2) TTGCTTTTGG 101.1 0.1011 P6.5 retina ACTCGGATGC CAGAAACAGA CAGGAGGAGG (2) GCCACGTATA GGGGGGGGGG TACACACACA (2) TGTGTGTGTG (2) TTGCTTTGTT (3) TTGCTTTTGG 80.1 0.0801 P10.5 crx- retina ACTCGGATGC CAGAAACAGA GCCACGTATA TACACACACA (2) TGCCCATCCC (2) TGTGTGTGTG (2) TTGCTTTGTT (3) TTGCTTTTGG 157.9 0.1579 P10.5 crx+ retina ACTCGGATGC CAGGAGGAGG (2) GCCACGTATA GGGGGGGGGG TACACACACA (2) TGTGAGTGTG TGTGTGTGTG (2) TTGCTTTTGG 107.5 0.1075 Adult retinal ACTCGGATGC AGACCCCAGC CAGGAGGAGG (2) GCCACGTATA GGGGGGGGGG TACACACACA (2) TGTGTGTGTG (2) TTGCTTTTGG 90.9 0.0909 ONL ACTCGGATGC AGACCCCAGC CTCACACAGA (2) GCCACGTATA GGGGCACTGG GGGGGGGGGG TACACACACA (2) TGTGAGTGTG TGTGTGTGTG (2) TTGCTTTTGG 59.2 0.0592