Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26722	Ndrg2	N-myc downstream regulated gene 2	14		29811
Gene Ontology	cell differentiation
Human Homolog	NDRG2[NDRG family member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 110 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGGCAGCC (4) 50.6 0.0506 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC TGGGATGCCC (2) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GCTGGCAGCC (4) 83.2 0.0832 Cb medulloblastoma TAAAAAGAAA (4) 13.9 0.0139 Cb medulloblastoma GAAGTCTCCT 4.6 0.0046 Cb medulloblastoma AAGATGCCGT 2.3 0.0023 Cb medulloblastoma GGGGGCTGTG (5) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture GCTGGCAGCC (4) 79.9 0.0799 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GAAGAGGGGG (4) 3.4 0.0034 P8 GC+1d culture TAAAAAGAAA (4) 1.1 0.0011 P8 GC+1d culture TATCTTCTCT (4) 1.1 0.0011 P8 GC+SHH+1d culture GCTGGCAGCC (4) 100.7 0.1007 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture TATCTTCTCT (4) 4.7 0.0047 P8 GC+SHH+1d culture GAAGAGGGGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTAAAGAAA (9) 1.2 0.0012 3T3 fibroblasts GCTGGCAGCC (4) 56.1 0.0561 3T3 fibroblasts GGGGGCTGTG (5) 7 0.007 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex GCTGGCAGCC (4) 54.4 0.0544 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex GCTGGCAGCC (4) 18.2 0.0182 P1 cortex TTTAAAGAAA (9) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GCTGGCAGCC (4) 27.2 0.0272 Hypothalamus TAAAAAGAAA (4) 25.4 0.0254 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus ATTCTTTGAC (3) 3.6 0.0036 Hypothalamus GAAGTCTCCT 3.6 0.0036 Hypothalamus AAGATGCCGT 1.8 0.0018 Hypothalamus GGGGGCTGTG (5) 1.8 0.0018 E12.5 retina GCTGGCAGCC (4) 58.2 0.0582 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GGCCCTCTTT (4) 3.8 0.0038 E12.5 retina GGGGGCTGTG (5) 1.9 0.0019 E12.5 retina TTTAAAGAAA (9) 1.9 0.0019 E14.5 retina GCTGGCAGCC (4) 67.4 0.0674 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TTTAAAGAAA (9) 3.6 0.0036 E14.5 retina ATTCTTTGAC (3) 1.8 0.0018 E14.5 retina GGCCCTCTTT (4) 1.8 0.0018 E14.5 retina TATCTTCTCT (4) 1.8 0.0018 E16.5 retina GCTGGCAGCC (4) 70.6 0.0706 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GGGGGCTGTG (5) 3.6 0.0036 E16.5 retina TATCTTCTCT (4) 3.6 0.0036 E16.5 retina TAAAAAGAAA (4) 1.8 0.0018 E16.5 retina TTTAAAGAAA (9) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GCTGGCAGCC (4) 105.5 0.1055 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina ATTCTTTGAC (3) 1.8 0.0018 E18.5 retina GGCCCTCTTT (4) 1.8 0.0018 E18.5 retina GGGGGCTGTG (5) 1.8 0.0018 E18.5 retina TGGGATGCCC (2) 1.8 0.0018 P0.5 retina GCTGGCAGCC (4) 56.9 0.0569 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TAAAAAGAAA (4) 2 0.002 P0.5 retina TATCTTCTCT (4) 2 0.002 P0.5 retina TTTAAAGAAA (9) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GCTGGCAGCC (4) 58.1 0.0581 P2.5 retina TTTTTTTTTT (433) 7 0.007 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GCTGGCAGCC (4) 67.4 0.0674 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina ATTCTTTGAC (3) 2 0.002 P4.5 retina TAAAAAGAAA (4) 2 0.002 P4.5 retina TATCTTCTCT (4) 2 0.002 P4.5 retina TGGGATGCCC (2) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GCTGGCAGCC (4) 46.7 0.0467 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TAAAAAGAAA (4) 5 0.005 P6.5 retina GGCCCTCTTT (4) 1.7 0.0017 P10.5 crx- retina GCTGGCAGCC (4) 66.9 0.0669 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina GGGGGCTGTG (5) 7.4 0.0074 P10.5 crx- retina TAAAAAGAAA (4) 3.7 0.0037 P10.5 crx- retina AAGATGCCGT 1.9 0.0019 P10.5 crx+ retina GCTGGCAGCC (4) 69.2 0.0692 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GAAGAGGGGG (4) 1.9 0.0019 P10.5 crx+ retina GGGGGCTGTG (5) 1.9 0.0019 Adult retinal GCTGGCAGCC (4) 20.4 0.0204 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GGCCCTCTTT (4) 1.9 0.0019 Adult retinal TAAAAAGAAA (4) 1.9 0.0019 Adult retinal TTTAAAGAAA (9) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL GCTGGCAGCC (4) 5.7 0.0057 ONL TAAAAAGAAA (4) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TTTAAAGAAA (9) 1.9 0.0019