Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26730	Hp	haptoglobin	8	8 55.0 cM	15439
Gene Ontology	acute-phase response | chymotrypsin activity | extracellular | extracellular space | hemoglobin binding | proteolysis and peptidolysis | trypsin activity
Human Homolog	HP[haptoglobin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCTGGTGG (15) 13.1 0.0131 P8 Cb GC CCTTTCTGCT (4) 8.2 0.0082 P8 Cb GC CTGCCTTGTT (5) 3.3 0.0033 P8 Cb GC GCCAGGGCCA (7) 3.3 0.0033 P8 Cb GC AATAAAAAAA (9) 1.6 0.0016 P8 Cb GC ACAGCTGCCC (3) 1.6 0.0016 P8 Cb GC CTGCTGTGGC (6) 1.6 0.0016 P8 Cb GC GGAGGGAAGG (9) 1.6 0.0016 Cb medulloblastoma CTGCTGGTGG (15) 11.6 0.0116 Cb medulloblastoma GCCAGGGCCA (7) 9.2 0.0092 Cb medulloblastoma AATAAAAAAA (9) 6.9 0.0069 Cb medulloblastoma CCTTTCTGCT (4) 2.3 0.0023 Cb medulloblastoma CTGCCTTGTT (5) 2.3 0.0023 P8 GC+1d culture CTGCTGGTGG (15) 16 0.016 P8 GC+1d culture GCCAGGGCCA (7) 8 0.008 P8 GC+1d culture CCTTTCTGCT (4) 4.6 0.0046 P8 GC+1d culture GAAGAGGGGG (4) 3.4 0.0034 P8 GC+1d culture GGAGGGAGGA (7) 3.4 0.0034 P8 GC+1d culture CTGCCTTGTT (5) 2.3 0.0023 P8 GC+1d culture GCCTGCCCCG (5) 2.3 0.0023 P8 GC+1d culture AATAAAAAAA (9) 1.1 0.0011 P8 GC+SHH+1d culture CTGCTGGTGG (15) 10.5 0.0105 P8 GC+SHH+1d culture CCTTTCTGCT (4) 5.9 0.0059 P8 GC+SHH+1d culture AATAAAAAAA (9) 2.3 0.0023 P8 GC+SHH+1d culture GCCAGGGCCA (7) 2.3 0.0023 P8 GC+SHH+1d culture ACAGCTGCCC (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGCCTTGTT (5) 1.2 0.0012 P8 GC+SHH+1d culture GAAGAGGGGG (4) 1.2 0.0012 P8 GC+SHH+1d culture GGAGGGAGGA (7) 1.2 0.0012 3T3 fibroblasts CTGCTGGTGG (15) 59.6 0.0596 3T3 fibroblasts AATAAAAAAA (9) 3.5 0.0035 3T3 fibroblasts GCCAGGGCCA (7) 3.5 0.0035 3T3 fibroblasts GCCTATCTGG (3) 3.5 0.0035 E15 cortex GCCTGCCCCG (5) 14.8 0.0148 E15 cortex CTGCTGGTGG (15) 9.9 0.0099 E15 cortex CTTGCCTGGG (2) 9.9 0.0099 E15 cortex AATAAAAAAA (9) 4.9 0.0049 E15 cortex GCCAGGGCCA (7) 4.9 0.0049 E15 cortex GCCTTTTGCC (4) 4.9 0.0049 P1 cortex CTGCTGGTGG (15) 4.5 0.0045 P1 cortex CTGCTGTGGC (6) 4.5 0.0045 P1 cortex GCCAGGGCCA (7) 4.5 0.0045 Hypothalamus CTGCTGGTGG (15) 7.2 0.0072 Hypothalamus AATAAAAAAA (9) 5.4 0.0054 Hypothalamus GCCAGGGCCA (7) 5.4 0.0054 Hypothalamus GGAGGGAGGA (7) 3.6 0.0036 Hypothalamus CCTTTCTGCT (4) 1.8 0.0018 E12.5 retina AATAAAAAAA (9) 3.8 0.0038 E12.5 retina CCTTTCTGCT (4) 3.8 0.0038 E12.5 retina CTGCTGTGGC (6) 3.8 0.0038 E14.5 retina GCCAGGGCCA (7) 7.3 0.0073 E14.5 retina CCTTTCTGCT (4) 5.5 0.0055 E14.5 retina AATAAAAAAA (9) 1.8 0.0018 E14.5 retina CTGCTGGTGG (15) 1.8 0.0018 E14.5 retina GGAGGGAGGA (7) 1.8 0.0018 E16.5 retina CCTTTCTGCT (4) 7.2 0.0072 E16.5 retina GCCAGGGCCA (7) 5.4 0.0054 E16.5 retina ACAGCTGCCC (3) 1.8 0.0018 E16.5 retina CTGCCTTGTT (5) 1.8 0.0018 E16.5 retina GCCTGCCCCG (5) 1.8 0.0018 E18.5 retina CTGCCTTGTT (5) 3.6 0.0036 E18.5 retina CTGCTGGTGG (15) 3.6 0.0036 E18.5 retina GCCAGGGCCA (7) 3.6 0.0036 E18.5 retina AATAAAAAAA (9) 1.8 0.0018 E18.5 retina CCTTTCTGCT (4) 1.8 0.0018 E18.5 retina GCCTGCCCCG (5) 1.8 0.0018 P0.5 retina CTGCTGGTGG (15) 9.8 0.0098 P0.5 retina CCTTTCTGCT (4) 7.9 0.0079 P0.5 retina GCCAGGGCCA (7) 5.9 0.0059 P0.5 retina ACAGCTGCCC (3) 2 0.002 P0.5 retina CTGCCTTGTT (5) 2 0.002 P0.5 retina CTTGCCTGGG (2) 2 0.002 P0.5 retina GCCTGCCCCG (5) 2 0.002 P0.5 retina GCCTTTTGCC (4) 2 0.002 P0.5 retina GGAGGGAAGG (9) 2 0.002 P0.5 retina GGAGGGAGGA (7) 2 0.002 P2.5 retina GCCAGGGCCA (7) 7 0.007 P2.5 retina CTGCTGGTGG (15) 5.3 0.0053 P2.5 retina CCTTTCTGCT (4) 3.5 0.0035 P2.5 retina GCCTGCCCCG (5) 1.8 0.0018 P2.5 retina GGAGGGAAGG (9) 1.8 0.0018 P2.5 retina GGAGGGAGGA (7) 1.8 0.0018 P4.5 retina AATAAAAAAA (9) 4 0.004 P4.5 retina CCTTTCTGCT (4) 4 0.004 P4.5 retina CTGCCTTGTT (5) 4 0.004 P4.5 retina CTGCTGGTGG (15) 2 0.002 P4.5 retina GCCAGGGCCA (7) 2 0.002 P4.5 retina GCCTGCCCCG (5) 2 0.002 P6.5 retina CTGCTGGTGG (15) 6.7 0.0067 P6.5 retina GCCTGCCCCG (5) 6.7 0.0067 P6.5 retina AATAAAAAAA (9) 3.3 0.0033 P6.5 retina CCTTTCTGCT (4) 3.3 0.0033 P6.5 retina GCCTTTTGCC (4) 3.3 0.0033 P6.5 retina GCCAGGGCCA (7) 1.7 0.0017 P6.5 retina GGAGGGAGGA (7) 1.7 0.0017 P10.5 crx- retina CTGCTGGTGG (15) 11.1 0.0111 P10.5 crx- retina GCCAGGGCCA (7) 9.3 0.0093 P10.5 crx- retina CCTTTCTGCT (4) 5.6 0.0056 P10.5 crx- retina CTGCTGTGGC (6) 1.9 0.0019 P10.5 crx- retina GCCTATCTGG (3) 1.9 0.0019 P10.5 crx- retina GCCTTTTGCC (4) 1.9 0.0019 P10.5 crx+ retina CCTTTCTGCT (4) 9.6 0.0096 P10.5 crx+ retina GCCAGGGCCA (7) 5.8 0.0058 P10.5 crx+ retina CTGCTGGTGG (15) 3.8 0.0038 P10.5 crx+ retina ACAGCTGCCC (3) 1.9 0.0019 P10.5 crx+ retina CTGCCTTGTT (5) 1.9 0.0019 P10.5 crx+ retina GAAGAGGGGG (4) 1.9 0.0019 Adult retinal CTGCTGGTGG (15) 20.4 0.0204 Adult retinal GCCTTTTGCC (4) 3.7 0.0037 Adult retinal AATAAAAAAA (9) 1.9 0.0019 Adult retinal CCTTTCTGCT (4) 1.9 0.0019 Adult retinal GCCAGGGCCA (7) 1.9 0.0019 Adult retinal GCCTATCTGG (3) 1.9 0.0019 Adult retinal GCCTGCCCCG (5) 1.9 0.0019 Adult retinal GGAGGGAAGG (9) 1.9 0.0019 Adult retinal GGAGGGAGGA (7) 1.9 0.0019 ONL CTGCTGGTGG (15) 7.7 0.0077 ONL GCCTTTTGCC (4) 7.7 0.0077 ONL GCCAGGGCCA (7) 5.7 0.0057 ONL GCCTGCCCCG (5) 5.7 0.0057 ONL CCTTTCTGCT (4) 3.8 0.0038 ONL GGAGGGAAGG (9) 1.9 0.0019