Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.267377	Scd1	stearoyl-Coenzyme A desaturase 1	19	19 43.0 cM	20249
Gene Ontology	endoplasmic reticulum | fatty acid biosynthesis | integral to membrane | iron ion binding | membrane | oxidoreductase activity | stearoyl-CoA 9-desaturase activity
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACCATTG GCGTTCCAGA (2) 3.2 0.0032 Cb medulloblastoma AAAACCATTG GCTGCCCTGG (2) 11.5 0.0115 P8 GC+1d culture GCTGCCCTGG (2) 2.3 0.0023 P8 GC+SHH+1d culture GCTGCCCTGG (2) 1.2 0.0012 3T3 fibroblasts AAAACCATTG GCTGCCCTGG (2) 7 0.007 E15 cortex GCTGCCCTGG (2) 4.9 0.0049 P1 cortex GCGTTCCAGA (2) 4.5 0.0045 Hypothalamus AAAACCATTG GCGTTCCAGA (2) GCTGCCCTGG (2) TCTGACCTGA (2) 7.2 0.0072 E12.5 retina AAAACCATTG GCGTTCCAGA (2) TCTGACCTGA (2) 7.6 0.0076 E14.5 retina GCGTTCCAGA (2) GCTGCCCTGG (2) TCTGACCTGA (2) 5.4 0.0054 E16.5 retina GCGTTCCAGA (2) GCTGCCCTGG (2) 3.6 0.0036 P0.5 retina GCGTTCCAGA (2) 2 0.002 P2.5 retina GCGTTCCAGA (2) GCTGCCCTGG (2) TCTGACCTGA (2) 8.8 0.0088 P4.5 retina GCGTTCCAGA (2) 2 0.002 P6.5 retina AAAACCATTG GCGTTCCAGA (2) 5 0.005 P10.5 crx- retina AAAACCATTG 1.9 0.0019 Adult retinal GCGTTCCAGA (2) GCTGCCCTGG (2) 5.6 0.0056 ONL TCTGACCTGA (2) 3.8 0.0038