| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CGGGACCCCA (2) GAGGTGCCGG (2) GCCTCCCCTT (2) GGGGTGCCCC GTGTTTATCA
| 12.9 | 0.0129 |
| Cb medulloblastoma | AGGCAGCCAG (2) CGGGACCCCA (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | GCCTCCCCTT (2) GCCTTGGGCA
| 22.8 | 0.0228 |
| P8 GC+SHH+1d culture | CGGGACCCCA (2) GCCTCCCCTT (2) GCCTTGGGCA
| 29.2 | 0.0292 |
| 3T3 fibroblasts | AGGCAGCCAG (2) GCCTCCCCTT (2) GCCTTGGGCA
| 14 | 0.014 |
| E15 cortex | GCCTCCCCTT (2)
| 14.8 | 0.0148 |
| P1 cortex | AGGCAGCCAG (2) GCCTCCCCTT (2) GCCTTGGGCA
| 13.5 | 0.0135 |
| Hypothalamus | AGGCAGCCAG (2) GAGGTGCCGG (2)
| 5.4 | 0.0054 |
| E12.5 retina | AGGCAGCCAG (2) GCCTCCCCTT (2) GCCTTGGGCA
| 7.6 | 0.0076 |
| E14.5 retina | AGGCAGCCAG (2) GAGGTGCCGG (2)
| 3.6 | 0.0036 |
| E16.5 retina | AGGCAGCCAG (2) CGGGACCCCA (2) GCCTCCCCTT (2)
| 12.6 | 0.0126 |
| E18.5 retina | CGGGACCCCA (2) GGGGTGCCCC GTGTTTATCA
| 7.2 | 0.0072 |
| P0.5 retina | GCCTCCCCTT (2)
| 9.8 | 0.0098 |
| P2.5 retina | AGGCAGCCAG (2) CGGGACCCCA (2)
| 8.8 | 0.0088 |
| P4.5 retina | CGGGACCCCA (2) GCCTCCCCTT (2)
| 8 | 0.008 |
| P6.5 retina | AGGCAGCCAG (2) CGGGACCCCA (2) GCCTCCCCTT (2)
| 13.4 | 0.0134 |
| P10.5 crx- retina | CGGGACCCCA (2) GAGGTGCCGG (2) GCCTCCCCTT (2) GCCTTGGGCA
| 7.6 | 0.0076 |
| P10.5 crx+ retina | GCCTCCCCTT (2)
| 1.9 | 0.0019 |
| Adult retinal | AGGCAGCCAG (2) CGGGACCCCA (2) GGGGTGCCCC
| 5.7 | 0.0057 |
| ONL | AGGCAGCCAG (2) CGGGACCCCA (2) GTGTTTATCA
| 7.6 | 0.0076 |