Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.267810	Hcngp	transcriptional regulator protein	11		57230
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	HCNGP[transcriptional regulator protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCTTCCAAGA (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCTTCCAAAA (7) 2.3 0.0023 Cb medulloblastoma CCTTCCAAGA (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCTTCCAAGA (2) 2.3 0.0023 P8 GC+1d culture CTCAGAAGCT (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCTTCCAAGA (2) 3.5 0.0035 P8 GC+SHH+1d culture CTCAGAAGCT (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CTCAGAAGCT (3) 7 0.007 3T3 fibroblasts CCTTCCAAGA (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CTCAGAAGCT (3) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CTCAGAAGCT (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GGCAGGTGGG (6) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CCTTCCAAGA (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CCTTCCAAGA (2) 3.6 0.0036 E16.5 retina GGCAGGTGGG (6) 3.6 0.0036 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCTTCCAAGA (2) 1.8 0.0018 E18.5 retina GGCAGGTGGG (6) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TGTGGGGGTG (6) 3.9 0.0039 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCTTCCAAGA (2) 3.5 0.0035 P2.5 retina GGCAGGTGGG (6) 3.5 0.0035 P2.5 retina CCTTCCAAAA (7) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCTTCCAAGA (2) 4 0.004 P4.5 retina CCTTCCAAAA (7) 2 0.002 P4.5 retina TGTGGGGGTG (6) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCTTCCAAGA (2) 5.6 0.0056 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCTTCCAAGA (2) 1.9 0.0019 P10.5 crx+ retina GGCAGGTGGG (6) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CTCAGAAGCT (3) 3.7 0.0037 Adult retinal CCTTCCAAGA (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCTTCCAAGA (2) 3.8 0.0038