Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.268079 Cspg3chondroitin sulfate proteoglycan 3 8  8 33.5 cM  13004 
 Gene Ontology calcium ion binding | cell adhesion | extracellular space | hyaluronic acid binding | sugar binding
 Human Homolog CSPG3[chondroitin sulfate proteoglycan 3 (neurocan)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTGTGTGTGTG (115)27.70.0277
P8 Cb GCGAACAGGCAG (6)17.90.0179
P8 Cb GCCCCAGCTCTT (3)3.30.0033
P8 Cb GCCTGGTCTGGC (2)3.30.0033
P8 Cb GCGGGGCACCTG (8)3.30.0033
P8 Cb GCCTTTAGGCTT1.60.0016
Cb medulloblastomaTGTGTGTGTG (115)30.10.0301
Cb medulloblastomaGAACAGGCAG (6)2.30.0023
P8 GC+1d cultureTGTGTGTGTG (115)27.40.0274
P8 GC+1d cultureGAACAGGCAG (6)160.016
P8 GC+1d cultureGGGGCACCTG (8)1.10.0011
P8 GC+SHH+1d cultureTGTGTGTGTG (115)28.10.0281
P8 GC+SHH+1d cultureGAACAGGCAG (6)16.40.0164
P8 GC+SHH+1d cultureCTTTAGGCTT2.30.0023
P8 GC+SHH+1d cultureCCCAGCTCTT (3)1.20.0012
P8 GC+SHH+1d cultureGGCTCTGTGA (3)1.20.0012
3T3 fibroblastsTGTGTGTGTG (115)280.028
3T3 fibroblastsGGGGCACCTG (8)10.50.0105
3T3 fibroblastsCCCAGCTCTT (3)3.50.0035
E15 cortexGAACAGGCAG (6)34.60.0346
E15 cortexGGGGCACCTG (8)9.90.0099
E15 cortexCTTTAGGCTT4.90.0049
E15 cortexGGCTCTGTGA (3)4.90.0049
P1 cortexGAACAGGCAG (6)27.30.0273
P1 cortexGGCTCTGTGA (3)18.20.0182
P1 cortexTGTGTGTGTG (115)18.20.0182
P1 cortexCTTTAGGCTT9.10.0091
P1 cortexGGGGCACCTG (8)4.50.0045
HypothalamusGAACAGGCAG (6)25.40.0254
HypothalamusTGTGTGTGTG (115)25.40.0254
HypothalamusCTGGTCTGGC (2)3.60.0036
HypothalamusGGCTCTGTGA (3)1.80.0018
E12.5 retinaTGTGTGTGTG (115)43.20.0432
E12.5 retinaGAACAGGCAG (6)7.50.0075
E14.5 retinaTGTGTGTGTG (115)54.70.0547
E14.5 retinaGAACAGGCAG (6)5.50.0055
E16.5 retinaTGTGTGTGTG (115)39.80.0398
E16.5 retinaGAACAGGCAG (6)7.20.0072
E18.5 retinaTGTGTGTGTG (115)47.30.0473
E18.5 retinaGAACAGGCAG (6)1.80.0018
E18.5 retinaGGGGCACCTG (8)1.80.0018
P0.5 retinaTGTGTGTGTG (115)21.60.0216
P0.5 retinaGAACAGGCAG (6)13.70.0137
P0.5 retinaCTTTAGGCTT5.90.0059
P0.5 retinaGGGGCACCTG (8)20.002
P2.5 retinaTGTGTGTGTG (115)35.20.0352
P2.5 retinaGAACAGGCAG (6)8.80.0088
P2.5 retinaGGGGCACCTG (8)1.80.0018
P4.5 retinaTGTGTGTGTG (115)47.60.0476
P4.5 retinaGAACAGGCAG (6)40.004
P6.5 retinaTGTGTGTGTG (115)41.70.0417
P6.5 retinaGAACAGGCAG (6)1.70.0017
P6.5 retinaGGGGCACCTG (8)1.70.0017
P10.5 crx- retinaTGTGTGTGTG (115)59.40.0594
P10.5 crx- retinaGAACAGGCAG (6)27.90.0279
P10.5 crx+ retinaTGTGTGTGTG (115)44.20.0442
P10.5 crx+ retinaGAACAGGCAG (6)13.50.0135
Adult retinalTGTGTGTGTG (115)53.70.0537
Adult retinalGAACAGGCAG (6)5.60.0056
Adult retinalCCCAGCTCTT (3)1.90.0019
ONLTGTGTGTGTG (115)230.023
ONLCCCAGCTCTT (3)1.90.0019
ONLGAACAGGCAG (6)1.90.0019