| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGCTGGCACA (3) ATAGTTCCAG (3) ATTTTTGTTT (5)
| 4.8 | 0.0048 |
| Cb medulloblastoma | AGCTGGCACA (3) ATAGTTCCAG (3) ATTTTTGTTT (5) TGTGAAAAAA (2)
| 13.8 | 0.0138 |
| P8 GC+1d culture | ACAGACATTT (3) ATTTTTGTTT (5) TGAAACATAT (4) TGTGAAAAAA (2) TTTGTGTGTT (2)
| 6.7 | 0.0067 |
| P8 GC+SHH+1d culture | AGCTGGCACA (3) ATTTTTGTTT (5) TGTGAAAAAA (2)
| 10.6 | 0.0106 |
| 3T3 fibroblasts | TGTGAAAAAA (2)
| 3.5 | 0.0035 |
| Hypothalamus | ACAGACATTT (3)
| 1.8 | 0.0018 |
| E12.5 retina | ACAGACATTT (3) ATAGTTCCAG (3) ATTTTTGTTT (5) GGGAAAGGCT (2) TGAAACATAT (4) TTTGTGTGTT (2)
| 17.1 | 0.0171 |
| E14.5 retina | ACAGACATTT (3) ATAGTTCCAG (3) GGGAAAGGCT (2) TTTGTGTGTT (2)
| 9 | 0.009 |
| E16.5 retina | ACAGACATTT (3) ATTTTTGTTT (5) GGGAAAGGCT (2)
| 5.4 | 0.0054 |
| E18.5 retina | ACAGACATTT (3) ATTTTTGTTT (5) TGTGAAAAAA (2)
| 5.4 | 0.0054 |
| P0.5 retina | AGCTGGCACA (3)
| 3.9 | 0.0039 |
| P4.5 retina | ATTTTTGTTT (5) TGTGAAAAAA (2)
| 9.9 | 0.0099 |
| P6.5 retina | ATTTTTGTTT (5) TGAAACATAT (4) TGTGAAAAAA (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | AGCTGGCACA (3) ATTTTTGTTT (5) TGTGAAAAAA (2) TTTGTGTGTT (2)
| 7.6 | 0.0076 |
| P10.5 crx+ retina | ATTTTTGTTT (5) TGTGAAAAAA (2)
| 7.7 | 0.0077 |
| Adult retinal | AGCTGGCACA (3) ATTTTTGTTT (5) TGTGAAAAAA (2)
| 9.4 | 0.0094 |
| ONL | ATTTTTGTTT (5)
| 13.4 | 0.0134 |