Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268185	Hnrpa3	heterogeneous nuclear ribonucleoprotein A3	2		229279
Gene Ontology	nucleus | ribonucleoprotein complex | RNA binding
Human Homolog	HNRPA3[heterogeneous nuclear ribonucleoprotein A3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 171 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGAGAGAAT (2) 32.6 0.0326 P8 Cb GC TTAGAAACTG 9.8 0.0098 P8 Cb GC AAGGGGGGCA (4) 4.9 0.0049 P8 Cb GC ACACAGTTGA (3) 3.3 0.0033 P8 Cb GC ATCCAAAGGA (2) 3.3 0.0033 P8 Cb GC GTTATTCTTT 3.3 0.0033 P8 Cb GC AAAAACAAAA (12) 1.6 0.0016 P8 Cb GC CCAGCCAGTC 1.6 0.0016 P8 Cb GC TCTTCTAATC 1.6 0.0016 P8 Cb GC TTAAGAACAT (5) 1.6 0.0016 P8 Cb GC TTATAAACTG (4) 1.6 0.0016 Cb medulloblastoma AAAAACAAAA (12) 37 0.037 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma TTATAAACTG (4) 6.9 0.0069 Cb medulloblastoma TCTTCTAATC 4.6 0.0046 Cb medulloblastoma TTAAGAACAT (5) 4.6 0.0046 Cb medulloblastoma AAGGGGGGCA (4) 2.3 0.0023 Cb medulloblastoma CAGTGCTAGC 2.3 0.0023 Cb medulloblastoma TGGAGAGAAT (2) 2.3 0.0023 Cb medulloblastoma TTAGAAACTG 2.3 0.0023 P8 GC+1d culture AAGGGGGGCA (4) 22.8 0.0228 P8 GC+1d culture TGGAGAGAAT (2) 20.5 0.0205 P8 GC+1d culture TTAGAAACTG 9.1 0.0091 P8 GC+1d culture AAAAACAAAA (12) 8 0.008 P8 GC+1d culture GAACTTTGGT (2) 5.7 0.0057 P8 GC+1d culture TTAAGAACAT (5) 4.6 0.0046 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TCTTCTAATC 2.3 0.0023 P8 GC+1d culture GTTATTCTTT 1.1 0.0011 P8 GC+1d culture TAGACTTTAT (4) 1.1 0.0011 P8 GC+1d culture TATGACTTTA 1.1 0.0011 P8 GC+SHH+1d culture TGGAGAGAAT (2) 35.1 0.0351 P8 GC+SHH+1d culture AAGGGGGGCA (4) 31.6 0.0316 P8 GC+SHH+1d culture AAAAACAAAA (12) 14.1 0.0141 P8 GC+SHH+1d culture TCTTCTAATC 10.5 0.0105 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TTAGAAACTG 4.7 0.0047 P8 GC+SHH+1d culture ACACAGTTGA (3) 3.5 0.0035 P8 GC+SHH+1d culture TTAAGAACAT (5) 3.5 0.0035 P8 GC+SHH+1d culture GAACTTTGGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GTAAGAAAAA (5) 2.3 0.0023 P8 GC+SHH+1d culture CAGTGCTAGC 1.2 0.0012 P8 GC+SHH+1d culture GCGGGGGGCG 1.2 0.0012 P8 GC+SHH+1d culture TAGACTTTAT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTATAAACTG (4) 1.2 0.0012 3T3 fibroblasts AAGGGGGGCA (4) 56.1 0.0561 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 3T3 fibroblasts TGGAGAGAAT (2) 3.5 0.0035 E15 cortex AAGGGGGGCA (4) 24.7 0.0247 E15 cortex TGGAGAGAAT (2) 14.8 0.0148 E15 cortex AAAAACAAAA (12) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex GTTATTCTTT 4.9 0.0049 E15 cortex TCTTCTAATC 4.9 0.0049 P1 cortex TGGAGAGAAT (2) 13.6 0.0136 P1 cortex TCTTCTAATC 9.1 0.0091 P1 cortex TTATAAACTG (4) 9.1 0.0091 P1 cortex AAAAACAAAA (12) 4.5 0.0045 P1 cortex AAGGGGGGCA (4) 4.5 0.0045 Hypothalamus TGGAGAGAAT (2) 5.4 0.0054 Hypothalamus TTATAAACTG (4) 5.4 0.0054 Hypothalamus AAAAACAAAA (12) 3.6 0.0036 Hypothalamus AAGGGGGGCA (4) 3.6 0.0036 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 Hypothalamus TCTTCTAATC 1.8 0.0018 E12.5 retina TGGAGAGAAT (2) 41.3 0.0413 E12.5 retina AAGGGGGGCA (4) 16.9 0.0169 E12.5 retina AAAAACAAAA (12) 13.1 0.0131 E12.5 retina TTAGAAACTG 7.5 0.0075 E12.5 retina GTTATTCTTT 5.6 0.0056 E12.5 retina GAACTTTGGT (2) 1.9 0.0019 E12.5 retina TAGACTTTAT (4) 1.9 0.0019 E12.5 retina TCTTCTAATC 1.9 0.0019 E12.5 retina TTATAAACTG (4) 1.9 0.0019 E14.5 retina TGGAGAGAAT (2) 45.5 0.0455 E14.5 retina TCTTCTAATC 7.3 0.0073 E14.5 retina TTAGAAACTG 7.3 0.0073 E14.5 retina AAAAACAAAA (12) 5.5 0.0055 E14.5 retina AAGGGGGGCA (4) 5.5 0.0055 E14.5 retina ACACAGTTGA (3) 3.6 0.0036 E14.5 retina TTAAGAACAT (5) 3.6 0.0036 E14.5 retina CAGTGCTAGC 1.8 0.0018 E14.5 retina GAACTTTGGT (2) 1.8 0.0018 E14.5 retina TTATAAACTG (4) 1.8 0.0018 E16.5 retina TGGAGAGAAT (2) 34.4 0.0344 E16.5 retina AAGGGGGGCA (4) 12.7 0.0127 E16.5 retina TCTTCTAATC 7.2 0.0072 E16.5 retina TTAGAAACTG 5.4 0.0054 E16.5 retina CCAGCCAGTC 1.8 0.0018 E16.5 retina GAACTTTGGT (2) 1.8 0.0018 E16.5 retina GTAAGAAAAA (5) 1.8 0.0018 E16.5 retina TATGACTTTA 1.8 0.0018 E16.5 retina TTATAAACTG (4) 1.8 0.0018 E18.5 retina TGGAGAGAAT (2) 27.3 0.0273 E18.5 retina AAGGGGGGCA (4) 10.9 0.0109 E18.5 retina AAAAACAAAA (12) 3.6 0.0036 E18.5 retina TCTTCTAATC 3.6 0.0036 E18.5 retina TATGACTTTA 1.8 0.0018 E18.5 retina TTAGAAACTG 1.8 0.0018 E18.5 retina TTATAAACTG (4) 1.8 0.0018 P0.5 retina AAGGGGGGCA (4) 29.4 0.0294 P0.5 retina TGGAGAGAAT (2) 27.5 0.0275 P0.5 retina TCTTCTAATC 7.9 0.0079 P0.5 retina GCGGGGGGCG 3.9 0.0039 P0.5 retina AAAAACAAAA (12) 2 0.002 P0.5 retina ACAAAGTTCA (6) 2 0.002 P0.5 retina ATCCAAAGGA (2) 2 0.002 P0.5 retina CAGTGCTAGC 2 0.002 P0.5 retina CCAGCCAGTC 2 0.002 P0.5 retina TTAAGAACAT (5) 2 0.002 P2.5 retina TGGAGAGAAT (2) 31.7 0.0317 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina AAGGGGGGCA (4) 5.3 0.0053 P2.5 retina TCTTCTAATC 5.3 0.0053 P2.5 retina AAAAACAAAA (12) 3.5 0.0035 P2.5 retina CAGTGCTAGC 1.8 0.0018 P2.5 retina GCGGGGGGCG 1.8 0.0018 P2.5 retina GTTATTCTTT 1.8 0.0018 P2.5 retina TTAGAAACTG 1.8 0.0018 P4.5 retina TGGAGAGAAT (2) 15.9 0.0159 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TCTTCTAATC 7.9 0.0079 P4.5 retina AAAAACAAAA (12) 4 0.004 P4.5 retina AAGGGGGGCA (4) 4 0.004 P4.5 retina GAACTTTGGT (2) 4 0.004 P4.5 retina TTAGAAACTG 4 0.004 P4.5 retina ATCCAAAGGA (2) 2 0.002 P4.5 retina GCGGGGGGCG 2 0.002 P4.5 retina TTATAAACTG (4) 2 0.002 P6.5 retina AAGGGGGGCA (4) 15 0.015 P6.5 retina TGGAGAGAAT (2) 13.3 0.0133 P6.5 retina TCTTCTAATC 10 0.01 P6.5 retina TTAGAAACTG 5 0.005 P6.5 retina CAGTGCTAGC 3.3 0.0033 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina TTATAAACTG (4) 1.7 0.0017 P10.5 crx- retina TGGAGAGAAT (2) 13 0.013 P10.5 crx- retina TTAGAAACTG 7.4 0.0074 P10.5 crx- retina TCTTCTAATC 5.6 0.0056 P10.5 crx- retina CAGTGCTAGC 3.7 0.0037 P10.5 crx- retina GCGGGGGGCG 3.7 0.0037 P10.5 crx- retina TTATAAACTG (4) 3.7 0.0037 P10.5 crx- retina AAAAACAAAA (12) 1.9 0.0019 P10.5 crx- retina GTAAGAAAAA (5) 1.9 0.0019 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina GCGGGGGGCG 5.8 0.0058 P10.5 crx+ retina AAGGGGGGCA (4) 3.8 0.0038 P10.5 crx+ retina TCTTCTAATC 3.8 0.0038 P10.5 crx+ retina CAGTGCTAGC 1.9 0.0019 P10.5 crx+ retina CCAGCCAGTC 1.9 0.0019 P10.5 crx+ retina CTTTCCTGTT (2) 1.9 0.0019 P10.5 crx+ retina GTTATTCTTT 1.9 0.0019 P10.5 crx+ retina TTATAAACTG (4) 1.9 0.0019 Adult retinal TGGAGAGAAT (2) 11.1 0.0111 Adult retinal TCTTCTAATC 5.6 0.0056 Adult retinal AAGGGGGGCA (4) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal AAAAACAAAA (12) 1.9 0.0019 Adult retinal CAGTGCTAGC 1.9 0.0019 Adult retinal CTTTCCTGTT (2) 1.9 0.0019 Adult retinal TTAAGAACAT (5) 1.9 0.0019 Adult retinal TTATAAACTG (4) 1.9 0.0019 ONL AAAAACAAAA (12) 3.8 0.0038 ONL ACAAAGTTCA (6) 3.8 0.0038 ONL TCTTCTAATC 3.8 0.0038 ONL TTAGAAACTG 3.8 0.0038 ONL AAGGGGGGCA (4) 1.9 0.0019 ONL CTTTCCTGTT (2) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TGGAGAGAAT (2) 1.9 0.0019 ONL TTATAAACTG (4) 1.9 0.0019