Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268369
1190007F08Rik
RIKEN cDNA 1190007F08 gene
4
68859
Mm.268369
2900010D03Rik
RIKEN cDNA 2900010D03 gene
4
72946
Human Homolog
KIAA1185[KIAA1185 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCTCCAGGC
(
6
)
3.3
0.0033
P8 Cb GC
AGACACGGCT
(
2
)
3.3
0.0033
P8 Cb GC
GACAGCCTTA (
3
)
1.6
0.0016
Cb medulloblastoma
ACCTCCAGGC
(
6
)
6.9
0.0069
Cb medulloblastoma
GAGAACAGCT (
3
)
2.3
0.0023
Cb medulloblastoma
TTGTAGAAAA
(
5
)
2.3
0.0023
P8 GC+1d culture
ACCTCCAGGC
(
6
)
3.4
0.0034
P8 GC+1d culture
AGACACGGCT
(
2
)
2.3
0.0023
P8 GC+1d culture
TTAATAGAAT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AGACACGGCT
(
2
)
1.2
0.0012
3T3 fibroblasts
ACCTCCAGGC
(
6
)
7
0.007
3T3 fibroblasts
GCCCCTGCAG (
3
)
3.5
0.0035
P1 cortex
ACCTCCAGGC
(
6
)
4.5
0.0045
Hypothalamus
ACCTCCAGGC
(
6
)
9.1
0.0091
Hypothalamus
AGACACGGCT
(
2
)
1.8
0.0018
E12.5 retina
GACAGCCTTA (
3
)
1.9
0.0019
E14.5 retina
ACCTCCAGGC
(
6
)
5.5
0.0055
E14.5 retina
CAGAACAGCT (
12
)
1.8
0.0018
E14.5 retina
TTGTAGAAAA
(
5
)
1.8
0.0018
E16.5 retina
ACCTCCAGGC
(
6
)
5.4
0.0054
E16.5 retina
GACAGCCTTA (
3
)
1.8
0.0018
E16.5 retina
GCCCCTGCAG (
3
)
1.8
0.0018
E18.5 retina
GACAGCCTTA (
3
)
1.8
0.0018
E18.5 retina
TTGTAGAAAA
(
5
)
1.8
0.0018
P0.5 retina
AGACACGGCT
(
2
)
5.9
0.0059
P2.5 retina
ACCTCCAGGC
(
6
)
5.3
0.0053
P2.5 retina
AGACACGGCT
(
2
)
3.5
0.0035
P2.5 retina
GACAGCCTTA (
3
)
1.8
0.0018
P2.5 retina
TTGTAGAAAA
(
5
)
1.8
0.0018
P4.5 retina
GACAGCCTTA (
3
)
11.9
0.0119
P4.5 retina
ACCTCCAGGC
(
6
)
4
0.004
P4.5 retina
CAGAACAGCT (
12
)
2
0.002
P4.5 retina
TTAATAGAAT
(
2
)
2
0.002
P4.5 retina
TTGTAGAAAA
(
5
)
2
0.002
P6.5 retina
AGACACGGCT
(
2
)
3.3
0.0033
P6.5 retina
ACCTCCAGGC
(
6
)
1.7
0.0017
P10.5 crx- retina
ACCTCCAGGC
(
6
)
11.1
0.0111
P10.5 crx- retina
AGACACGGCT
(
2
)
1.9
0.0019
P10.5 crx- retina
TTAATAGAAT
(
2
)
1.9
0.0019
P10.5 crx- retina
TTGTAGAAAA
(
5
)
1.9
0.0019
P10.5 crx+ retina
ACCTCCAGGC
(
6
)
1.9
0.0019
P10.5 crx+ retina
GACAGCCTTA (
3
)
1.9
0.0019
P10.5 crx+ retina
GAGAACAGCT (
3
)
1.9
0.0019
Adult retinal
ACCTCCAGGC
(
6
)
18.5
0.0185
Adult retinal
TTGTAGAAAA
(
5
)
1.9
0.0019
ONL
ACCTCCAGGC
(
6
)
11.5
0.0115
ONL
CAGAACAGCT (
12
)
1.9
0.0019
