Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268378	Cacna1h	calcium channel, voltage-dependent, T type, alpha 1H subunit	17	17 7.5 cM	58226
Gene Ontology	calcium channel activity | calcium ion binding | calcium ion transport | cation channel activity | cation transport | integral to membrane | ion channel activity | ion transport | low voltage-gated calcium channel activity | membrane | transport | voltage-gated calcium channel activity | voltage-gated calcium channel complex | voltage-gated ion channel activity
Human Homolog	CACNA1H[calcium channel, voltage-dependent, alpha 1H subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTACCTGCA (3) 3.3 0.0033 Cb medulloblastoma CCTACCTGCA (3) 6.9 0.0069 P8 GC+1d culture CCTACCTGCA (3) 3.4 0.0034 P8 GC+SHH+1d culture CCTACCTGCA (3) 2.3 0.0023 3T3 fibroblasts CCTACCTGCA (3) 7 0.007 P1 cortex CCTACCTGCA (3) 4.5 0.0045 Hypothalamus CCTACCTGCA (3) 1.8 0.0018 E12.5 retina CCTACCTGCA (3) TTTCTTTTCA (2) 9.4 0.0094 E14.5 retina CCTACCTGCA (3) TTTTTTTTCA (2) 7.3 0.0073 E16.5 retina CCTACCTGCA (3) TGACACACAG (7) TTTCTTTTCA (2) TTTTTTTTCA (2) 10.8 0.0108 E18.5 retina CAATAAGACG (2) CCTACCTGCA (3) TTTTTTTTCA (2) 9 0.009 P0.5 retina CAATAAGACG (2) CCTACCTGCA (3) 11.8 0.0118 P2.5 retina CAATAAGACG (2) 1.8 0.0018 P4.5 retina CCTACCTGCA (3) TGACACACAG (7) 4 0.004 P6.5 retina CAATAAGACG (2) CCTACCTGCA (3) 5 0.005 P10.5 crx- retina CAATAAGACG (2) CCTACCTGCA (3) TTTCTTTTCA (2) TTTTTTTTCA (2) 20.5 0.0205 P10.5 crx+ retina CCTACCTGCA (3) TGACACACAG (7) 3.8 0.0038 Adult retinal CCTACCTGCA (3) 3.7 0.0037 ONL TGACACACAG (7) 3.8 0.0038