Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268448
AI314338
expressed sequence AI314338
7
101522
Mm.268448
BC031140
cDNA sequence BC031140
7
233799
Human Homolog
HXMA[xenobiotic/medium-chain fatty acid:CoA ligase]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 78 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GCAAAACCAG (
3
)
14.7
0.0147
P8 Cb GC
GGAATCTGAT (
5
)
11.4
0.0114
P8 Cb GC
TGACATCTCA (
4
)
9.8
0.0098
P8 Cb GC
CTTGGGCCCA (
5
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
GCAAAACCAG (
3
)
13.9
0.0139
Cb medulloblastoma
GGAATCTGAT (
5
)
4.6
0.0046
Cb medulloblastoma
TGACATCTCA (
4
)
4.6
0.0046
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GCAAAACCAG (
3
)
24
0.024
P8 GC+1d culture
TGACATCTCA (
4
)
5.7
0.0057
P8 GC+1d culture
GGAATCTGAT (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GCAAAACCAG (
3
)
23.4
0.0234
P8 GC+SHH+1d culture
GGAATCTGAT (
5
)
9.4
0.0094
P8 GC+SHH+1d culture
TGACATCTCA (
4
)
8.2
0.0082
P8 GC+SHH+1d culture
GAGGGCTCGG
(
3
)
1.2
0.0012
3T3 fibroblasts
GCAAAACCAG (
3
)
31.5
0.0315
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GGAATCTGAT (
5
)
3.5
0.0035
3T3 fibroblasts
TGACATCTCA (
4
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GCAAAACCAG (
3
)
14.8
0.0148
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
GCAAAACCAG (
3
)
4.5
0.0045
P1 cortex
TGACATCTCA (
4
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GCAAAACCAG (
3
)
12.7
0.0127
Hypothalamus
TGACATCTCA (
4
)
3.6
0.0036
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GCAAAACCAG (
3
)
20.7
0.0207
E12.5 retina
GGAATCTGAT (
5
)
5.6
0.0056
E12.5 retina
TGACATCTCA (
4
)
3.8
0.0038
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GCAAAACCAG (
3
)
12.8
0.0128
E14.5 retina
TGACATCTCA (
4
)
5.5
0.0055
E14.5 retina
TTGTCCTCTG
(
6
)
3.6
0.0036
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GCAAAACCAG (
3
)
10.9
0.0109
E16.5 retina
GGAATCTGAT (
5
)
3.6
0.0036
E16.5 retina
TTGTCCTCTG
(
6
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GCAAAACCAG (
3
)
12.7
0.0127
E18.5 retina
TGACATCTCA (
4
)
3.6
0.0036
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GCAAAACCAG (
3
)
13.7
0.0137
P0.5 retina
GGAATCTGAT (
5
)
3.9
0.0039
P0.5 retina
TGACATCTCA (
4
)
3.9
0.0039
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GCAAAACCAG (
3
)
14.1
0.0141
P2.5 retina
TGACATCTCA (
4
)
7
0.007
P2.5 retina
GAGGGCTCGG
(
3
)
1.8
0.0018
P2.5 retina
GGAATCTGAT (
5
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GCAAAACCAG (
3
)
13.9
0.0139
P4.5 retina
TGACATCTCA (
4
)
4
0.004
P4.5 retina
CTTGGGCCCA (
5
)
2
0.002
P4.5 retina
GGAATCTGAT (
5
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GCAAAACCAG (
3
)
16.7
0.0167
P6.5 retina
TGACATCTCA (
4
)
5
0.005
P6.5 retina
GAGGGCTCGG
(
3
)
1.7
0.0017
P6.5 retina
GGAATCTGAT (
5
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GCAAAACCAG (
3
)
27.9
0.0279
P10.5 crx- retina
TGACATCTCA (
4
)
3.7
0.0037
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GCAAAACCAG (
3
)
15.4
0.0154
P10.5 crx+ retina
TGACATCTCA (
4
)
13.5
0.0135
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GCAAAACCAG (
3
)
7.4
0.0074
Adult retinal
GGAATCTGAT (
5
)
3.7
0.0037
Adult retinal
CTTGGGCCCA (
5
)
1.9
0.0019
Adult retinal
TGACATCTCA (
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GCAAAACCAG (
3
)
9.6
0.0096
ONL
TGACATCTCA (
4
)
3.8
0.0038
