Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26870	Phf6	PHD finger protein 6	X		70998
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	PHF6[PHD finger protein 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTCAAAAAT (2) 4.9 0.0049 P8 Cb GC AAACTTAATT (5) 3.3 0.0033 P8 Cb GC GTGGATTTTC (7) 3.3 0.0033 P8 Cb GC ATGCATTCCT (2) 1.6 0.0016 P8 Cb GC TTTGTTTTCT (4) 1.6 0.0016 Cb medulloblastoma GTGGATTTTC (7) 13.9 0.0139 Cb medulloblastoma AAACTTAATT (5) 6.9 0.0069 Cb medulloblastoma GGTCAAAAAT (2) 4.6 0.0046 Cb medulloblastoma TTTGTTTTCT (4) 2.3 0.0023 P8 GC+1d culture TTTGTTTTCT (4) 13.7 0.0137 P8 GC+1d culture GGTCAAAAAT (2) 2.3 0.0023 P8 GC+1d culture GTGGATTTTC (7) 1.1 0.0011 P8 GC+SHH+1d culture AAACTTAATT (5) 8.2 0.0082 P8 GC+SHH+1d culture TTTGTTTTCT (4) 7 0.007 P8 GC+SHH+1d culture GGTCAAAAAT (2) 4.7 0.0047 P8 GC+SHH+1d culture GTGGATTTTC (7) 1.2 0.0012 E15 cortex GGTCAAAAAT (2) 14.8 0.0148 E15 cortex GTGGATTTTC (7) 4.9 0.0049 E15 cortex TTTGTTTTCT (4) 4.9 0.0049 P1 cortex GGTCAAAAAT (2) 4.5 0.0045 P1 cortex TTTGTTTTCT (4) 4.5 0.0045 Hypothalamus AAACTTAATT (5) 3.6 0.0036 Hypothalamus GTGGATTTTC (7) 3.6 0.0036 Hypothalamus AAATTAATTT (5) 1.8 0.0018 Hypothalamus GGTCAAAAAT (2) 1.8 0.0018 Hypothalamus TTTGTTTTCT (4) 1.8 0.0018 E12.5 retina AAACTTAATT (5) 5.6 0.0056 E12.5 retina GTGGATTTTC (7) 3.8 0.0038 E12.5 retina ACATTATTTG (2) 1.9 0.0019 E12.5 retina ATGCATTCCT (2) 1.9 0.0019 E14.5 retina AAACTTAATT (5) 5.5 0.0055 E16.5 retina AAACTTAATT (5) 9.1 0.0091 E16.5 retina TTTGTTTTCT (4) 3.6 0.0036 E16.5 retina GGTCAAAAAT (2) 1.8 0.0018 E18.5 retina AAACTTAATT (5) 1.8 0.0018 E18.5 retina ACATTATTTG (2) 1.8 0.0018 E18.5 retina GGTCAAAAAT (2) 1.8 0.0018 E18.5 retina GTGGATTTTC (7) 1.8 0.0018 E18.5 retina TTTGTTTTCT (4) 1.8 0.0018 P0.5 retina TTTGTTTTCT (4) 2 0.002 P2.5 retina TTTGTTTTCT (4) 3.5 0.0035 P2.5 retina GTGGATTTTC (7) 1.8 0.0018 P4.5 retina AAACTTAATT (5) 2 0.002 P6.5 retina TTTGTTTTCT (4) 5 0.005 P6.5 retina GGTCAAAAAT (2) 3.3 0.0033 P6.5 retina GTGGATTTTC (7) 3.3 0.0033 P6.5 retina AAACTTAATT (5) 1.7 0.0017 P6.5 retina AAATTAATTT (5) 1.7 0.0017 P10.5 crx- retina AAACTTAATT (5) 5.6 0.0056 P10.5 crx- retina TTTGTTTTCT (4) 3.7 0.0037 P10.5 crx- retina AAATTAATTT (5) 1.9 0.0019 P10.5 crx- retina GTGGATTTTC (7) 1.9 0.0019 P10.5 crx+ retina TTTGTTTTCT (4) 3.8 0.0038 P10.5 crx+ retina ACATTATTTG (2) 1.9 0.0019 P10.5 crx+ retina GGTCAAAAAT (2) 1.9 0.0019 P10.5 crx+ retina TTGTTTCTTC (5) 1.9 0.0019 Adult retinal TTTGTTTTCT (4) 5.6 0.0056 Adult retinal TTGTTTCTTC (5) 1.9 0.0019 ONL AAACTTAATT (5) 1.9 0.0019 ONL ATGCATTCCT (2) 1.9 0.0019