Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268737	Csnb	casein beta	5	5 44.91 cM	12991
Gene Ontology	extracellular | extracellular space | transport | transporter activity
Human Homolog	CSN2[casein beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 309 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGCAAAGA (4) 17.9 0.0179 P8 Cb GC GACTATATAT (3) 9.8 0.0098 P8 Cb GC TTTGAGAGGC (2) 4.9 0.0049 P8 Cb GC CTGCACCAAT (4) 3.3 0.0033 P8 Cb GC GTACAAAAAT (4) 3.3 0.0033 P8 Cb GC GTCAAAAAGA (3) 3.3 0.0033 P8 Cb GC GTCCCAAAAT (3) 3.3 0.0033 P8 Cb GC TATTATTTGG (5) 3.3 0.0033 P8 Cb GC TTTCCTTATT (7) 3.3 0.0033 P8 Cb GC CTACAAGAAA (3) 1.6 0.0016 P8 Cb GC CTCACAAAAA (4) 1.6 0.0016 P8 Cb GC CTTACCAAAA (3) 1.6 0.0016 P8 Cb GC CTTATCCTCA 1.6 0.0016 P8 Cb GC GAAGAAAGAA (5) 1.6 0.0016 P8 Cb GC GGAAGAAAGA (3) 1.6 0.0016 P8 Cb GC TCCCCAGCCT (4) 1.6 0.0016 P8 Cb GC TTATTTCTTC (6) 1.6 0.0016 P8 Cb GC TTCCAATCTT (3) 1.6 0.0016 Cb medulloblastoma GAAGCAAAGA (4) 46.2 0.0462 Cb medulloblastoma CTTATCCTCA 13.9 0.0139 Cb medulloblastoma GTACAAAAAT (4) 13.9 0.0139 Cb medulloblastoma GAGAAAAGGA (9) 9.2 0.0092 Cb medulloblastoma CTACCAAAAA (4) 6.9 0.0069 Cb medulloblastoma TATTATTTGG (5) 6.9 0.0069 Cb medulloblastoma GACTATATAT (3) 4.6 0.0046 Cb medulloblastoma CTACAAAAAA (6) 2.3 0.0023 Cb medulloblastoma CTGCACCAAT (4) 2.3 0.0023 Cb medulloblastoma GCTTCTCATT (5) 2.3 0.0023 Cb medulloblastoma GGAAAATGCT 2.3 0.0023 Cb medulloblastoma GGAAGAAAGA (3) 2.3 0.0023 Cb medulloblastoma GGGAGAAGAA (6) 2.3 0.0023 Cb medulloblastoma GTCAAAAAGA (3) 2.3 0.0023 Cb medulloblastoma TCAATAAAAT (2) 2.3 0.0023 Cb medulloblastoma TTCCTCAGCA (3) 2.3 0.0023 P8 GC+1d culture GAAGCAAAGA (4) 20.5 0.0205 P8 GC+1d culture GACTATATAT (3) 14.8 0.0148 P8 GC+1d culture TATTATTTGG (5) 13.7 0.0137 P8 GC+1d culture GTACAAAAAT (4) 10.3 0.0103 P8 GC+1d culture TTTGAGAGGC (2) 5.7 0.0057 P8 GC+1d culture CTGCACCAAT (4) 3.4 0.0034 P8 GC+1d culture CTTATCCTCA 3.4 0.0034 P8 GC+1d culture GTCCCAAAAT (3) 3.4 0.0034 P8 GC+1d culture CATCCACAAA (3) 2.3 0.0023 P8 GC+1d culture CTACAAAAAA (6) 2.3 0.0023 P8 GC+1d culture CTACCAAAAA (4) 2.3 0.0023 P8 GC+1d culture GAAGAAAGAA (5) 2.3 0.0023 P8 GC+1d culture GGAAAGGTGA (2) 2.3 0.0023 P8 GC+1d culture GAGAAAAGGA (9) 1.1 0.0011 P8 GC+1d culture GCATTCATTT (4) 1.1 0.0011 P8 GC+1d culture GCTTCTCATT (5) 1.1 0.0011 P8 GC+1d culture GGAAGAAAGA (3) 1.1 0.0011 P8 GC+1d culture GGAAGACAAG (4) 1.1 0.0011 P8 GC+1d culture TCAGTAAAGT (4) 1.1 0.0011 P8 GC+1d culture TTCCTCAGCA (3) 1.1 0.0011 P8 GC+1d culture TTTCCTTATT (7) 1.1 0.0011 P8 GC+SHH+1d culture GAAGCAAAGA (4) 17.6 0.0176 P8 GC+SHH+1d culture GACTATATAT (3) 16.4 0.0164 P8 GC+SHH+1d culture GTACAAAAAT (4) 9.4 0.0094 P8 GC+SHH+1d culture TATTATTTGG (5) 5.9 0.0059 P8 GC+SHH+1d culture TTTCCTTATT (7) 4.7 0.0047 P8 GC+SHH+1d culture GAAGAAAGAA (5) 3.5 0.0035 P8 GC+SHH+1d culture GAGAAAAGGA (9) 3.5 0.0035 P8 GC+SHH+1d culture TTTGAGAGGC (2) 3.5 0.0035 P8 GC+SHH+1d culture CTACCAAAAA (4) 2.3 0.0023 P8 GC+SHH+1d culture CTTATCCTCA 2.3 0.0023 P8 GC+SHH+1d culture TCAGTAAAGT (4) 2.3 0.0023 P8 GC+SHH+1d culture CATCCACAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CCAAGAGCAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CCTACAAGAA (4) 1.2 0.0012 P8 GC+SHH+1d culture CCTTCAAATT (5) 1.2 0.0012 P8 GC+SHH+1d culture CTACAAAAAA (6) 1.2 0.0012 P8 GC+SHH+1d culture CTCACAAAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture CTGCACCAAT (4) 1.2 0.0012 P8 GC+SHH+1d culture CTTACCAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAAAAGGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture GGAAAATGCT 1.2 0.0012 P8 GC+SHH+1d culture GGAAAGGTGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCAAAAAGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTCATCAACA 1.2 0.0012 P8 GC+SHH+1d culture TCAATAAAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTATTTCTTC (6) 1.2 0.0012 3T3 fibroblasts GAAGCAAAGA (4) 10.5 0.0105 3T3 fibroblasts TTTGAGAGGC (2) 10.5 0.0105 3T3 fibroblasts GCTTCTCATT (5) 7 0.007 3T3 fibroblasts CTTATCCTCA 3.5 0.0035 3T3 fibroblasts GTACAAAAAT (4) 3.5 0.0035 E15 cortex GAGAAAAGGA (9) 14.8 0.0148 E15 cortex GAAGCAAAGA (4) 9.9 0.0099 E15 cortex GTACAAAAAT (4) 4.9 0.0049 E15 cortex GTCCCAAAAT (3) 4.9 0.0049 P1 cortex GAAGCAAAGA (4) 9.1 0.0091 P1 cortex CTACAAGAAA (3) 4.5 0.0045 P1 cortex CTGCACCAAT (4) 4.5 0.0045 P1 cortex GGAAAGGTGA (2) 4.5 0.0045 P1 cortex GGAAGAAAGA (3) 4.5 0.0045 P1 cortex GTACAAAACA (5) 4.5 0.0045 P1 cortex TATTATTTGG (5) 4.5 0.0045 P1 cortex TTTCCTTATT (7) 4.5 0.0045 Hypothalamus GAAGCAAAGA (4) 38 0.038 Hypothalamus GACTATATAT (3) 25.4 0.0254 Hypothalamus TATTATTTGG (5) 7.2 0.0072 Hypothalamus CTTATCCTCA 5.4 0.0054 Hypothalamus GAGAAAAGGA (9) 5.4 0.0054 Hypothalamus GTACAAAAAT (4) 5.4 0.0054 Hypothalamus TGACCGGGAC (2) 5.4 0.0054 Hypothalamus CTTACCAAAA (3) 3.6 0.0036 Hypothalamus TCAGTAAAGT (4) 3.6 0.0036 Hypothalamus TTTGAGAGGC (2) 3.6 0.0036 Hypothalamus CCTTCAAATT (5) 1.8 0.0018 Hypothalamus CTACAAGAAA (3) 1.8 0.0018 Hypothalamus GCTACAAAAA (3) 1.8 0.0018 Hypothalamus GCTTCTCATT (5) 1.8 0.0018 Hypothalamus GGAAAATGCT 1.8 0.0018 Hypothalamus GGAAGACAAG (4) 1.8 0.0018 Hypothalamus TTCCAATCTT (3) 1.8 0.0018 Hypothalamus TTCCCAACTT (4) 1.8 0.0018 E12.5 retina GAAGCAAAGA (4) 18.8 0.0188 E12.5 retina TTTGAGAGGC (2) 15 0.015 E12.5 retina GACTATATAT (3) 13.1 0.0131 E12.5 retina TATTATTTGG (5) 7.5 0.0075 E12.5 retina CTACCAAAAA (4) 5.6 0.0056 E12.5 retina TCAGTAAAGT (4) 5.6 0.0056 E12.5 retina CTTATCCTCA 3.8 0.0038 E12.5 retina TTTCCTTATT (7) 3.8 0.0038 E12.5 retina CTACAAAAAA (6) 1.9 0.0019 E12.5 retina GAGAAAAGGA (9) 1.9 0.0019 E12.5 retina GGAAAGGTGA (2) 1.9 0.0019 E12.5 retina GGAAGAAAGA (3) 1.9 0.0019 E12.5 retina GTACAAAAAT (4) 1.9 0.0019 E12.5 retina GTCCCAAAAT (3) 1.9 0.0019 E14.5 retina GAAGCAAAGA (4) 27.3 0.0273 E14.5 retina GACTATATAT (3) 14.6 0.0146 E14.5 retina TTTGAGAGGC (2) 10.9 0.0109 E14.5 retina TATTATTTGG (5) 5.5 0.0055 E14.5 retina CTACCAAAAA (4) 3.6 0.0036 E14.5 retina GCTTCTCATT (5) 3.6 0.0036 E14.5 retina GTCCCAAAAT (3) 3.6 0.0036 E14.5 retina CCTACAAGAA (4) 1.8 0.0018 E14.5 retina CTACAAGAAA (3) 1.8 0.0018 E14.5 retina CTTATCCTCA 1.8 0.0018 E14.5 retina GAAGACAAAG (6) 1.8 0.0018 E14.5 retina GTACAAAAAT (4) 1.8 0.0018 E14.5 retina TCAGTAAAGT (4) 1.8 0.0018 E14.5 retina TCCCCAGCCT (4) 1.8 0.0018 E14.5 retina TTATTTCTTC (6) 1.8 0.0018 E14.5 retina TTTCCTTATT (7) 1.8 0.0018 E14.5 retina TTTTTTTTCA (4) 1.8 0.0018 E16.5 retina GAAGCAAAGA (4) 52.5 0.0525 E16.5 retina GACTATATAT (3) 23.5 0.0235 E16.5 retina GTCCCAAAAT (3) 5.4 0.0054 E16.5 retina TTCCTCAGCA (3) 5.4 0.0054 E16.5 retina AGCTCTTCCT (3) 3.6 0.0036 E16.5 retina CTACCAAAAA (4) 3.6 0.0036 E16.5 retina CTTATCCTCA 3.6 0.0036 E16.5 retina GAAGACAAAG (6) 3.6 0.0036 E16.5 retina TTTGAGAGGC (2) 3.6 0.0036 E16.5 retina CCAAGAGCAA (3) 1.8 0.0018 E16.5 retina GCTACAAAAA (3) 1.8 0.0018 E16.5 retina GCTTCTCATT (5) 1.8 0.0018 E16.5 retina GGAAGACAAG (4) 1.8 0.0018 E16.5 retina GTACAAAAAT (4) 1.8 0.0018 E16.5 retina TTATTTCTTC (6) 1.8 0.0018 E16.5 retina TTTCCTTATT (7) 1.8 0.0018 E16.5 retina TTTTTTTTCA (4) 1.8 0.0018 E18.5 retina GAAGCAAAGA (4) 29.1 0.0291 E18.5 retina GACTATATAT (3) 29.1 0.0291 E18.5 retina TATTATTTGG (5) 12.7 0.0127 E18.5 retina GTACAAAAAT (4) 9.1 0.0091 E18.5 retina CTACCAAAAA (4) 7.3 0.0073 E18.5 retina CTACAAAAAA (6) 3.6 0.0036 E18.5 retina GAAGAAAGAA (5) 3.6 0.0036 E18.5 retina GCTACAAAAA (3) 3.6 0.0036 E18.5 retina TTCCAATCTT (3) 3.6 0.0036 E18.5 retina TTTTTTTTCA (4) 3.6 0.0036 E18.5 retina CCTTCAAATT (5) 1.8 0.0018 E18.5 retina CTCACAAAAA (4) 1.8 0.0018 E18.5 retina GACTCTTTTT (2) 1.8 0.0018 E18.5 retina GGAAAATGCT 1.8 0.0018 E18.5 retina GGAAGAAAGA (3) 1.8 0.0018 E18.5 retina GTCCCAAAAT (3) 1.8 0.0018 E18.5 retina TCAGTAAAGT (4) 1.8 0.0018 E18.5 retina TTATTTCTTC (6) 1.8 0.0018 E18.5 retina TTTGAGAGGC (2) 1.8 0.0018 P0.5 retina GAAGCAAAGA (4) 17.7 0.0177 P0.5 retina TTTGAGAGGC (2) 11.8 0.0118 P0.5 retina CTACCAAAAA (4) 7.9 0.0079 P0.5 retina CTTATCCTCA 5.9 0.0059 P0.5 retina GACTATATAT (3) 3.9 0.0039 P0.5 retina GTACAAAAAT (4) 3.9 0.0039 P0.5 retina TATTATTTGG (5) 3.9 0.0039 P0.5 retina TCCCCAGCCT (4) 3.9 0.0039 P0.5 retina CATCCACAAA (3) 2 0.002 P0.5 retina CTACAAAAAA (6) 2 0.002 P0.5 retina GAAGAAAGAA (5) 2 0.002 P0.5 retina TTATTTCTTC (6) 2 0.002 P0.5 retina TTTCCTTATT (7) 2 0.002 P2.5 retina GAAGCAAAGA (4) 72.2 0.0722 P2.5 retina GACTATATAT (3) 15.8 0.0158 P2.5 retina GTACAAAAAT (4) 8.8 0.0088 P2.5 retina TATTATTTGG (5) 8.8 0.0088 P2.5 retina GTCCCAAAAT (3) 5.3 0.0053 P2.5 retina GGAAGAAAGA (3) 3.5 0.0035 P2.5 retina TTTGAGAGGC (2) 3.5 0.0035 P2.5 retina CTACAAAAAA (6) 1.8 0.0018 P2.5 retina CTACCAAAAA (4) 1.8 0.0018 P2.5 retina CTCACAAAAA (4) 1.8 0.0018 P2.5 retina GAGAAAAGGA (9) 1.8 0.0018 P2.5 retina GCTACAAAAA (3) 1.8 0.0018 P2.5 retina TTATTTCTTC (6) 1.8 0.0018 P4.5 retina GAAGCAAAGA (4) 71.3 0.0713 P4.5 retina GACTATATAT (3) 17.8 0.0178 P4.5 retina TATTATTTGG (5) 9.9 0.0099 P4.5 retina CTTATCCTCA 5.9 0.0059 P4.5 retina TCAGTAAAGT (4) 5.9 0.0059 P4.5 retina CTACCAAAAA (4) 4 0.004 P4.5 retina GGAAGAAAGA (3) 4 0.004 P4.5 retina GTCCCAAAAT (3) 4 0.004 P4.5 retina TTTCCTTATT (7) 4 0.004 P4.5 retina CATCCACAAA (3) 2 0.002 P4.5 retina CCTACAAGAA (4) 2 0.002 P4.5 retina GAAAAAGGGG (6) 2 0.002 P4.5 retina GTACAAAAAT (4) 2 0.002 P4.5 retina TTCCAATCTT (3) 2 0.002 P4.5 retina TTCCCAACTT (4) 2 0.002 P6.5 retina GAAGCAAAGA (4) 68.4 0.0684 P6.5 retina GACTATATAT (3) 10 0.01 P6.5 retina GTACAAAAAT (4) 6.7 0.0067 P6.5 retina TTTCCTTATT (7) 5 0.005 P6.5 retina TTTGAGAGGC (2) 5 0.005 P6.5 retina CTACCAAAAA (4) 3.3 0.0033 P6.5 retina CTCACAAAAA (4) 3.3 0.0033 P6.5 retina CTTATCCTCA 3.3 0.0033 P6.5 retina TATTATTTGG (5) 3.3 0.0033 P6.5 retina TCAGTAAAGT (4) 3.3 0.0033 P6.5 retina AGCTCTTCCT (3) 1.7 0.0017 P6.5 retina CTACAAAAAA (6) 1.7 0.0017 P6.5 retina GAAGAAAGAA (5) 1.7 0.0017 P6.5 retina GACTCTTTTT (2) 1.7 0.0017 P6.5 retina GGAAGAAAGA (3) 1.7 0.0017 P6.5 retina GTCCCAAAAT (3) 1.7 0.0017 P6.5 retina TCAATAAAAT (2) 1.7 0.0017 P6.5 retina TCCCCAGCCT (4) 1.7 0.0017 P6.5 retina TTATTTCTTC (6) 1.7 0.0017 P6.5 retina TTCCCAACTT (4) 1.7 0.0017 P10.5 crx- retina GAAGCAAAGA (4) 94.7 0.0947 P10.5 crx- retina GACTCTATAT 18.6 0.0186 P10.5 crx- retina GTACAAAAAT (4) 14.9 0.0149 P10.5 crx- retina GACTATATAT (3) 5.6 0.0056 P10.5 crx- retina TTTGAGAGGC (2) 5.6 0.0056 P10.5 crx- retina CTACCAAAAA (4) 3.7 0.0037 P10.5 crx- retina GAAGAAAGAA (5) 3.7 0.0037 P10.5 crx- retina GTCCCAAAAT (3) 3.7 0.0037 P10.5 crx- retina CCAAGAGCAA (3) 1.9 0.0019 P10.5 crx- retina GACAGAAACA (5) 1.9 0.0019 P10.5 crx- retina GAGAAAAGGA (9) 1.9 0.0019 P10.5 crx- retina GCATTCATTT (4) 1.9 0.0019 P10.5 crx- retina GGAAAATGCT 1.9 0.0019 P10.5 crx- retina GGAAAGGTGA (2) 1.9 0.0019 P10.5 crx- retina TTCCAATCTT (3) 1.9 0.0019 P10.5 crx- retina TTCCTCAGCA (3) 1.9 0.0019 P10.5 crx- retina TTTTTTTTCA (4) 1.9 0.0019 P10.5 crx+ retina GAAGCAAAGA (4) 75 0.075 P10.5 crx+ retina GACTATATAT (3) 9.6 0.0096 P10.5 crx+ retina GTCCCAAAAT (3) 3.8 0.0038 P10.5 crx+ retina CCAAGAGCAA (3) 1.9 0.0019 P10.5 crx+ retina CTACAAAAAA (6) 1.9 0.0019 P10.5 crx+ retina CTACAAGAAA (3) 1.9 0.0019 P10.5 crx+ retina CTACCAAAAA (4) 1.9 0.0019 P10.5 crx+ retina CTTATCCTCA 1.9 0.0019 P10.5 crx+ retina GACAGAAACA (5) 1.9 0.0019 P10.5 crx+ retina GACTCCATTT (3) 1.9 0.0019 P10.5 crx+ retina GGAAAATGCT 1.9 0.0019 P10.5 crx+ retina GTACAAAACA (5) 1.9 0.0019 P10.5 crx+ retina GTCATCAACA 1.9 0.0019 P10.5 crx+ retina TATTATTTGG (5) 1.9 0.0019 P10.5 crx+ retina TCAATAAAAT (2) 1.9 0.0019 P10.5 crx+ retina TCAGTAAAGT (4) 1.9 0.0019 P10.5 crx+ retina TTTCCTTATT (7) 1.9 0.0019 P10.5 crx+ retina TTTGAGAGGC (2) 1.9 0.0019 Adult retinal GAAGCAAAGA (4) 13 0.013 Adult retinal CTACCAAAAA (4) 7.4 0.0074 Adult retinal CTTATCCTCA 5.6 0.0056 Adult retinal GACTATATAT (3) 5.6 0.0056 Adult retinal GTACAAAAAT (4) 5.6 0.0056 Adult retinal TCAGTAAAGT (4) 5.6 0.0056 Adult retinal CTGCACCAAT (4) 3.7 0.0037 Adult retinal TTTGAGAGGC (2) 3.7 0.0037 Adult retinal CCAAGAGCAA (3) 1.9 0.0019 Adult retinal CCTACAAGAA (4) 1.9 0.0019 Adult retinal GAAGAAAGAA (5) 1.9 0.0019 Adult retinal GAGAAAAGGA (9) 1.9 0.0019 Adult retinal GGAAGAAAGA (3) 1.9 0.0019 Adult retinal GGAAGACAAG (4) 1.9 0.0019 Adult retinal GTACAAAACA (5) 1.9 0.0019 Adult retinal TCAAAAATGT (3) 1.9 0.0019 Adult retinal TTATTTCTTC (6) 1.9 0.0019 ONL GAAGCAAAGA (4) 26.8 0.0268 ONL GCATTCATTT (4) 5.7 0.0057 ONL CTACCAAAAA (4) 3.8 0.0038 ONL GAAGAAAGAA (5) 3.8 0.0038 ONL GACTATATAT (3) 3.8 0.0038 ONL GGGAGAAGAA (6) 3.8 0.0038 ONL TCAGTAAAGT (4) 3.8 0.0038 ONL CTTATCCTCA 1.9 0.0019 ONL GACAGAAACA (5) 1.9 0.0019 ONL GACTCTTTTT (2) 1.9 0.0019 ONL GTCATCAACA 1.9 0.0019 ONL TTCCAATCTT (3) 1.9 0.0019 ONL TTTCCTTATT (7) 1.9 0.0019