Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268932
0610038D11Rik
RIKEN cDNA 0610038D11 gene
19
67674
Human Homolog
HSPC152[hypothetical protein HSPC152]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGGGAGTGG (
2
)
21.2
0.0212
P8 Cb GC
TGTGACCCCC
(
3
)
11.4
0.0114
P8 Cb GC
GGGCAAGCCA (
3
)
6.5
0.0065
Cb medulloblastoma
TGTGACCCCC
(
3
)
13.9
0.0139
Cb medulloblastoma
GGGCAAGCCA (
3
)
9.2
0.0092
Cb medulloblastoma
ACACGTCTAT
(
2
)
2.3
0.0023
Cb medulloblastoma
GGGGGAGTGG (
2
)
2.3
0.0023
P8 GC+1d culture
GGGGGAGTGG (
2
)
54.8
0.0548
P8 GC+1d culture
TGTGACCCCC
(
3
)
25.1
0.0251
P8 GC+1d culture
GGGCAAGCCA (
3
)
4.6
0.0046
P8 GC+SHH+1d culture
GGGGGAGTGG (
2
)
37.5
0.0375
P8 GC+SHH+1d culture
TGTGACCCCC
(
3
)
22.2
0.0222
P8 GC+SHH+1d culture
GGGCAAGCCA (
3
)
3.5
0.0035
3T3 fibroblasts
TGTGACCCCC
(
3
)
3.5
0.0035
E15 cortex
GGGGGAGTGG (
2
)
326.6
0.3266
E15 cortex
GGGCAAGCCA (
3
)
19.8
0.0198
E15 cortex
TGTGACCCCC
(
3
)
19.8
0.0198
P1 cortex
GGGGGAGTGG (
2
)
163.6
0.1636
Hypothalamus
GGGGGAGTGG (
2
)
43.5
0.0435
Hypothalamus
TGTGACCCCC
(
3
)
19.9
0.0199
Hypothalamus
GGGCAAGCCA (
3
)
7.2
0.0072
Hypothalamus
ACACGTCTAT
(
2
)
1.8
0.0018
E12.5 retina
GGGGGAGTGG (
2
)
15
0.015
E12.5 retina
TGTGACCCCC
(
3
)
9.4
0.0094
E12.5 retina
GGGCAAGCCA (
3
)
7.5
0.0075
E14.5 retina
TGTGACCCCC
(
3
)
23.7
0.0237
E14.5 retina
GGGGGAGTGG (
2
)
18.2
0.0182
E14.5 retina
GGGCAAGCCA (
3
)
1.8
0.0018
E16.5 retina
GGGGGAGTGG (
2
)
23.5
0.0235
E16.5 retina
TGTGACCCCC
(
3
)
18.1
0.0181
E16.5 retina
GGGCAAGCCA (
3
)
1.8
0.0018
E18.5 retina
GGGGGAGTGG (
2
)
29.1
0.0291
E18.5 retina
TGTGACCCCC
(
3
)
14.6
0.0146
E18.5 retina
GGGCAAGCCA (
3
)
3.6
0.0036
P0.5 retina
GGGGGAGTGG (
2
)
100.1
0.1001
P0.5 retina
TGTGACCCCC
(
3
)
17.7
0.0177
P2.5 retina
GGGGGAGTGG (
2
)
40.5
0.0405
P2.5 retina
TGTGACCCCC
(
3
)
21.1
0.0211
P2.5 retina
GGGCAAGCCA (
3
)
10.6
0.0106
P2.5 retina
ACACGTCTAT
(
2
)
1.8
0.0018
P4.5 retina
GGGGGAGTGG (
2
)
41.6
0.0416
P4.5 retina
TGTGACCCCC
(
3
)
15.9
0.0159
P4.5 retina
GGGCAAGCCA (
3
)
4
0.004
P6.5 retina
GGGGGAGTGG (
2
)
46.7
0.0467
P6.5 retina
TGTGACCCCC
(
3
)
28.3
0.0283
P6.5 retina
GGGCAAGCCA (
3
)
3.3
0.0033
P10.5 crx- retina
GGGGGAGTGG (
2
)
20.4
0.0204
P10.5 crx- retina
TGTGACCCCC
(
3
)
9.3
0.0093
P10.5 crx- retina
GGGCAAGCCA (
3
)
7.4
0.0074
P10.5 crx+ retina
GGGGGAGTGG (
2
)
15.4
0.0154
P10.5 crx+ retina
TGTGACCCCC
(
3
)
13.5
0.0135
P10.5 crx+ retina
GGGCAAGCCA (
3
)
11.5
0.0115
Adult retinal
TGTGACCCCC
(
3
)
24.1
0.0241
Adult retinal
GGGCAAGCCA (
3
)
9.3
0.0093
Adult retinal
GGGGGAGTGG (
2
)
1.9
0.0019
ONL
TGTGACCCCC
(
3
)
7.7
0.0077
ONL
GGGCAAGCCA (
3
)
5.7
0.0057
