Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.269025	2810417H13Rik	RIKEN cDNA 2810417H13 gene	9		68026
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGCTTTAA (10) 32.6 0.0326 P8 Cb GC TTTTTGGCAG 13.1 0.0131 P8 Cb GC TTGTTAAAAT (4) 9.8 0.0098 P8 Cb GC TTTCTTGTTT (7) 4.9 0.0049 P8 Cb GC AGGAGAAAGT 3.3 0.0033 P8 Cb GC GCTATACAGA (5) 1.6 0.0016 P8 Cb GC TAGCCCAGGC (30) 1.6 0.0016 P8 Cb GC TTTGCTTTTA (4) 1.6 0.0016 Cb medulloblastoma TTTGCTTTAA (10) 6.9 0.0069 Cb medulloblastoma TAGCCCAGGC (30) 4.6 0.0046 Cb medulloblastoma TTGTTAAAAT (4) 2.3 0.0023 P8 GC+1d culture TTTGCTTTAA (10) 19.4 0.0194 P8 GC+1d culture TTGTTAAAAT (4) 5.7 0.0057 P8 GC+1d culture TTTCTTGTTT (7) 2.3 0.0023 P8 GC+1d culture TTTTTGGCAG 2.3 0.0023 P8 GC+1d culture TAGCCCAGGC (30) 1.1 0.0011 P8 GC+1d culture TTTGCTTTTA (4) 1.1 0.0011 P8 GC+SHH+1d culture TTTGCTTTAA (10) 38.6 0.0386 P8 GC+SHH+1d culture TTTTTGGCAG 12.9 0.0129 P8 GC+SHH+1d culture TAGCCCAGGC (30) 8.2 0.0082 P8 GC+SHH+1d culture TTGTTAAAAT (4) 4.7 0.0047 P8 GC+SHH+1d culture GTGCGGACCA 2.3 0.0023 P8 GC+SHH+1d culture TAAATTTGGG 2.3 0.0023 P8 GC+SHH+1d culture CTTACACTTA 1.2 0.0012 P8 GC+SHH+1d culture GCTATACAGA (5) 1.2 0.0012 3T3 fibroblasts TAGCCCAGGC (30) 14 0.014 3T3 fibroblasts CTTACACTTA 3.5 0.0035 3T3 fibroblasts TTTGCTTTAA (10) 3.5 0.0035 3T3 fibroblasts TTTTTGGCAG 3.5 0.0035 E15 cortex TAGCCCAGGC (30) 24.7 0.0247 E15 cortex TTTTTGGCAG 9.9 0.0099 E15 cortex GCTATACAGA (5) 4.9 0.0049 P1 cortex TTTGCTTTAA (10) 18.2 0.0182 P1 cortex GCTATACAGA (5) 4.5 0.0045 P1 cortex TTTCTTGTTT (7) 4.5 0.0045 Hypothalamus TTTGCTTTAA (10) 21.7 0.0217 Hypothalamus TAGCCCAGGC (30) 7.2 0.0072 Hypothalamus GCTATACAGA (5) 1.8 0.0018 Hypothalamus GTCAAACAGA (4) 1.8 0.0018 E12.5 retina TTTGCTTTAA (10) 22.5 0.0225 E12.5 retina TAGCCCAGGC (30) 7.5 0.0075 E12.5 retina TTTTTGGCAG 5.6 0.0056 E12.5 retina AGGAGAAAGT 3.8 0.0038 E12.5 retina TTGTTAAAAT (4) 3.8 0.0038 E12.5 retina GCTATACAGA (5) 1.9 0.0019 E12.5 retina TAAATTTGGG 1.9 0.0019 E14.5 retina TTTGCTTTAA (10) 43.7 0.0437 E14.5 retina TAGCCCAGGC (30) 12.8 0.0128 E14.5 retina TTTCTTGTTT (7) 9.1 0.0091 E14.5 retina GCTATACAGA (5) 5.5 0.0055 E14.5 retina AGGAGAAAGT 3.6 0.0036 E14.5 retina TTGTTAAAAT (4) 3.6 0.0036 E14.5 retina CTTACACTTA 1.8 0.0018 E14.5 retina TAAATTTGGG 1.8 0.0018 E16.5 retina TTTGCTTTAA (10) 47.1 0.0471 E16.5 retina TAGCCCAGGC (30) 7.2 0.0072 E16.5 retina TTGTTAAAAT (4) 3.6 0.0036 E16.5 retina TTCACACAAG (3) 1.8 0.0018 E16.5 retina TTTCTTGTTT (7) 1.8 0.0018 E18.5 retina TTTGCTTTAA (10) 41.8 0.0418 E18.5 retina TTTTTGGCAG 9.1 0.0091 E18.5 retina TAGCCCAGGC (30) 7.3 0.0073 E18.5 retina TTGTTAAAAT (4) 5.5 0.0055 E18.5 retina TAAATTTGGG 3.6 0.0036 E18.5 retina TTCACACAAG (3) 3.6 0.0036 E18.5 retina AGGAGAAAGT 1.8 0.0018 E18.5 retina GTGCGGACCA 1.8 0.0018 E18.5 retina TTTCTTGTTT (7) 1.8 0.0018 P0.5 retina TTTGCTTTAA (10) 15.7 0.0157 P0.5 retina TTTTTGGCAG 7.9 0.0079 P0.5 retina TAGCCCAGGC (30) 5.9 0.0059 P0.5 retina TTGTTAAAAT (4) 3.9 0.0039 P0.5 retina AGGAGAAAGT 2 0.002 P0.5 retina GCTATACAGA (5) 2 0.002 P0.5 retina TTTCTTGTTT (7) 2 0.002 P2.5 retina TTTGCTTTAA (10) 38.7 0.0387 P2.5 retina TAGCCCAGGC (30) 8.8 0.0088 P2.5 retina TTTTTGGCAG 7 0.007 P2.5 retina TTGTTAAAAT (4) 5.3 0.0053 P2.5 retina CTTAAACTTA (2) 3.5 0.0035 P2.5 retina TTTCTTGTTT (7) 3.5 0.0035 P2.5 retina GTCAAACAGA (4) 1.8 0.0018 P2.5 retina TTTGCTTTTA (4) 1.8 0.0018 P4.5 retina TTTGCTTTAA (10) 47.6 0.0476 P4.5 retina ATAGAGGTCC 2 0.002 P4.5 retina TAAATTTGGG 2 0.002 P4.5 retina TAGCCCAGGC (30) 2 0.002 P4.5 retina TTGTTAAAAT (4) 2 0.002 P4.5 retina TTTGCTTTTA (4) 2 0.002 P6.5 retina TTTGCTTTAA (10) 48.4 0.0484 P6.5 retina GCTATACAGA (5) 5 0.005 P6.5 retina TAGCCCAGGC (30) 5 0.005 P6.5 retina TTTCTTGTTT (7) 3.3 0.0033 P6.5 retina TTTTTGGCAG 3.3 0.0033 P10.5 crx- retina TTTGCTTTAA (10) 31.6 0.0316 P10.5 crx- retina CTTAAACTTA (2) 1.9 0.0019 P10.5 crx- retina GCTATACAGA (5) 1.9 0.0019 P10.5 crx- retina TAAATTTGGG 1.9 0.0019 P10.5 crx- retina TAGCCCAGGC (30) 1.9 0.0019 P10.5 crx- retina TTGTTAAAAT (4) 1.9 0.0019 P10.5 crx- retina TTTCTTGTTT (7) 1.9 0.0019 P10.5 crx+ retina TTTGCTTTAA (10) 28.8 0.0288 P10.5 crx+ retina ATAGAGGTCC 3.8 0.0038 P10.5 crx+ retina GCTATACAGA (5) 3.8 0.0038 P10.5 crx+ retina TAGCCCAGGC (30) 3.8 0.0038 P10.5 crx+ retina GTCAAACAGA (4) 1.9 0.0019 Adult retinal TTTGCTTTAA (10) 7.4 0.0074 Adult retinal TTGTTAAAAT (4) 3.7 0.0037 Adult retinal GCTATACAGA (5) 1.9 0.0019 Adult retinal TAGCCCAGGC (30) 1.9 0.0019 Adult retinal TTTGCTTTTA (4) 1.9 0.0019 ONL TTTGCTTTAA (10) 15.3 0.0153 ONL TAGCCCAGGC (30) 9.6 0.0096 ONL GCTATACAGA (5) 3.8 0.0038 ONL TTGTTAAAAT (4) 1.9 0.0019 ONL TTTCTTGTTT (7) 1.9 0.0019