Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.269061
9130404D08Rik
RIKEN cDNA 9130404D08 gene
8
8 B3.3
74549
Mm.269061
A930019L04Rik
RIKEN cDNA A930019L04 gene
8
109309
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 12 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 83 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
GTGGCGCACG (
61
)
13.1
0.0131
P8 Cb GC
GCCAGGTGCT
(
3
)
4.9
0.0049
P8 Cb GC
GTGGCTTTGC (
5
)
3.3
0.0033
P8 Cb GC
CCCATCATCC (
6
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GTGGCGCACG (
61
)
6.9
0.0069
Cb medulloblastoma
CCCATCATCC (
6
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GTGGCGCACG (
61
)
6.8
0.0068
P8 GC+1d culture
CCCATCATCC (
6
)
3.4
0.0034
P8 GC+1d culture
GCCAGGTGCT
(
3
)
2.3
0.0023
P8 GC+1d culture
CCTTTTAATC (
5
)
1.1
0.0011
P8 GC+1d culture
CTAGCCTGGG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GTGGCGCACG (
61
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTTTAATC (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
CTAGCCTGGG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GGTGGCTTTG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGTTAGTTGA
(
2
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GTGGCGCACG (
61
)
63.1
0.0631
3T3 fibroblasts
GCCAGGTGCT
(
3
)
7
0.007
3T3 fibroblasts
CCCATCATCC (
6
)
3.5
0.0035
E15 cortex
GTGGCGCACG (
61
)
113.8
0.1138
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
GCCAGGTGCT
(
3
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
GTGGCGCACG (
61
)
18.2
0.0182
P1 cortex
CCTTTTAATC (
5
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
GTGGCGCACG (
61
)
3.6
0.0036
Hypothalamus
CTAGCCTGGG
(
2
)
1.8
0.0018
Hypothalamus
GCCAGGTGCT
(
3
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
GTGGCGCACG (
61
)
11.3
0.0113
E12.5 retina
CCCATCATCC (
6
)
9.4
0.0094
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
GTGGCGCACG (
61
)
29.2
0.0292
E14.5 retina
CCTTTTAATC (
5
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
GTGGCGCACG (
61
)
25.4
0.0254
E16.5 retina
CCCATCATCC (
6
)
1.8
0.0018
E16.5 retina
GCCAGGTGCT
(
3
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
GTGGCGCACG (
61
)
10.9
0.0109
E18.5 retina
GCCAGGTGCT
(
3
)
5.5
0.0055
E18.5 retina
CCCATCATCC (
6
)
1.8
0.0018
E18.5 retina
GGTTAGTTGA
(
2
)
1.8
0.0018
E18.5 retina
GTGGCTTTGC (
5
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GTGGCGCACG (
61
)
25.5
0.0255
P0.5 retina
CCTTTTAATC (
5
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
GTGGCGCACG (
61
)
17.6
0.0176
P2.5 retina
CCCATCATCC (
6
)
3.5
0.0035
P2.5 retina
CCTTTTAATC (
5
)
3.5
0.0035
P2.5 retina
GGTTAGTTGA
(
2
)
3.5
0.0035
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
GTGGCGCACG (
61
)
17.8
0.0178
P4.5 retina
CCTTTTAATC (
5
)
4
0.004
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
GTGGCGCACG (
61
)
38.3
0.0383
P6.5 retina
CCCATCATCC (
6
)
1.7
0.0017
P6.5 retina
CCTTTTAATC (
5
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GTGGCGCACG (
61
)
13
0.013
P10.5 crx- retina
CCTTTTAATC (
5
)
1.9
0.0019
P10.5 crx- retina
GCCAGGTGCT
(
3
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
GTGGCGCACG (
61
)
32.7
0.0327
P10.5 crx+ retina
GCCAGGTGCT
(
3
)
5.8
0.0058
P10.5 crx+ retina
CCTTTTAATC (
5
)
3.8
0.0038
P10.5 crx+ retina
CCCATCATCC (
6
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
GTGGCGCACG (
61
)
22.2
0.0222
Adult retinal
CTAGCCTGGG
(
2
)
9.3
0.0093
Adult retinal
CCTTTTAATC (
5
)
3.7
0.0037
Adult retinal
GGTGGCTTTG
(
4
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
GTGGCGCACG (
61
)
23
0.023
ONL
GCCAGGTGCT
(
3
)
5.7
0.0057
ONL
GGTGGCTTTG
(
4
)
1.9
0.0019
