Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.269413
D430025H09Rik
RIKEN cDNA D430025H09 gene
9
9 B
102747
Human Homolog
FLJ20156[hypothetical protein FLJ20156]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 9 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTTCAAAGC
(
2
)
3.3
0.0033
Cb medulloblastoma
ACCTGGAGAG
(
3
)
AGATGCCTCC
ATTTCAAAGC
(
2
)
16.2
0.0162
P8 GC+1d culture
ATTTCAAAGC
(
2
)
GTAGCCCATC
3.4
0.0034
P8 GC+SHH+1d culture
ATTTCAAAGC
(
2
)
3.5
0.0035
P1 cortex
ATTTCAAAGC
(
2
)
9.1
0.0091
Hypothalamus
AGATGCCTCC
1.8
0.0018
E12.5 retina
ATTTCAAAGC
(
2
)
9.4
0.0094
E14.5 retina
ACCTGGAGAG
(
3
)
ATTTCAAAGC
(
2
)
GTAGCCCATC
14.5
0.0145
E16.5 retina
AGATGCCTCC
ATTTCAAAGC
(
2
)
23.5
0.0235
E18.5 retina
ACCTGGAGAG
(
3
)
ATTTCAAAGC
(
2
)
12.7
0.0127
P0.5 retina
ACCTGGAGAG
(
3
)
AGATGCCTCC
ATTTCAAAGC
(
2
)
7.9
0.0079
P2.5 retina
ATTTCAAAGC
(
2
)
GTAGCCCATC
21.2
0.0212
P4.5 retina
ATTTCAAAGC
(
2
)
4
0.004
P6.5 retina
ACCTGGAGAG
(
3
)
ATTTCAAAGC
(
2
)
10
0.01
P10.5 crx- retina
ACCTGGAGAG
(
3
)
AGATGCCTCC
ATTTCAAAGC
(
2
)
GTAGCCCATC
22.4
0.0224
P10.5 crx+ retina
ATTTCAAAGC
(
2
)
GTAGCCCATC
11.5
0.0115
Adult retinal
ATTTCAAAGC
(
2
)
GTAGCCCATC
7.5
0.0075
ONL
ATTTCAAAGC
(
2
)
3.8
0.0038
