Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270044	BC031407	cDNA sequence BC031407	8		234366
Gene Ontology	nucleus | regulation of transcription, DNA-dependent
Human Homolog	p66alpha[p66 alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GTGAAAGGCA (5) 4.9 0.0049 P8 Cb GC CCTGCCAAGA (3) 3.3 0.0033 P8 Cb GC TGATTGGTCG 3.3 0.0033 P8 Cb GC AGATTGTGTC 1.6 0.0016 P8 Cb GC GCCATCTATA 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCTGCCAAGA (3) 4.6 0.0046 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCTGCCAAGA (3) 12.6 0.0126 P8 GC+1d culture TGATTGGTCG 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCTGCCAAGA (3) 8.2 0.0082 P8 GC+SHH+1d culture TGATTGGTCG 4.7 0.0047 P8 GC+SHH+1d culture AGATTGTGTC 3.5 0.0035 P8 GC+SHH+1d culture GCCATCTATA 2.3 0.0023 P8 GC+SHH+1d culture GTGAAAGGCA (5) 2.3 0.0023 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CCTGCCAAGA (3) 24.5 0.0245 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCCATCTATA 3.5 0.0035 3T3 fibroblasts TGATTGGTCG 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCTGCCAAGA (3) 34.6 0.0346 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGATTGGTCG 4.9 0.0049 E15 cortex TGGGAGTTGA 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCTGCCAAGA (3) 18.2 0.0182 P1 cortex TGGGAGTTGA 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CCTGCCAAGA (3) 1.8 0.0018 Hypothalamus GTGAAAGGCA (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCTGCCAAGA (3) 11.3 0.0113 E12.5 retina GTGAAAGGCA (5) 5.6 0.0056 E12.5 retina AGATTGTGTC 3.8 0.0038 E12.5 retina GAACCAATTG (2) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CCTGCCAAGA (3) 3.6 0.0036 E14.5 retina AGATTGTGTC 1.8 0.0018 E14.5 retina GAACCAATTG (2) 1.8 0.0018 E14.5 retina GTGAAAGGCA (5) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CCTGCCAAGA (3) 16.3 0.0163 E16.5 retina GTGAAAGGCA (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCTGCCAAGA (3) 5.5 0.0055 E18.5 retina AGATTGTGTC 1.8 0.0018 E18.5 retina GCCATCTATA 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCTGCCAAGA (3) 21.6 0.0216 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGGGAGTTGA 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCTGCCAAGA (3) 10.6 0.0106 P2.5 retina GTGAAAGGCA (5) 5.3 0.0053 P2.5 retina AGATTGTGTC 1.8 0.0018 P2.5 retina GCCATCTATA 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCTGCCAAGA (3) 4 0.004 P4.5 retina GCCATCTATA 4 0.004 P4.5 retina AGATTGTGTC 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCTGCCAAGA (3) 25 0.025 P6.5 retina GTGAAAGGCA (5) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GAACCAATTG (2) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCTGCCAAGA (3) 9.3 0.0093 P10.5 crx- retina GTGAAAGGCA (5) 1.9 0.0019 P10.5 crx- retina TGATTGGTCG 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GTGAAAGGCA (5) 3.8 0.0038 P10.5 crx+ retina CCTGCCAAGA (3) 1.9 0.0019 P10.5 crx+ retina GCCATCTATA 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCTGCCAAGA (3) 5.6 0.0056 Adult retinal GTGAAAGGCA (5) 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCTGCCAAGA (3) 9.6 0.0096 ONL GCCATCTATA 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AGATTGTGTC 1.9 0.0019 ONL GTGAAAGGCA (5) 1.9 0.0019