Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.270088
2210409B22Rik
RIKEN cDNA 2210409B22 gene
4
70174
Mm.270088
AW547365
expressed sequence AW547365
4
100434
Mm.270088
1700060J05Rik
RIKEN cDNA 1700060J05 gene
4
73391
Mm.270088
9130223C08Rik
RIKEN cDNA 9130223C08 gene
4
77708
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAACTTGTAG
(
6
)
11.4
0.0114
P8 Cb GC
TGCTCGCAAT
(
4
)
8.2
0.0082
P8 Cb GC
ATGCAGGGAT
(
6
)
6.5
0.0065
P8 Cb GC
AAGCTGAGAG
(
7
)
1.6
0.0016
Cb medulloblastoma
TAACTTGTAG
(
6
)
6.9
0.0069
Cb medulloblastoma
ATGCAGGGAT
(
6
)
2.3
0.0023
Cb medulloblastoma
CATTTGTCAG
(
5
)
2.3
0.0023
Cb medulloblastoma
TGCTCGCAAT
(
4
)
2.3
0.0023
P8 GC+1d culture
TAACTTGTAG
(
6
)
20.5
0.0205
P8 GC+1d culture
CAAGGGGCAG (
6
)
5.7
0.0057
P8 GC+1d culture
TGCTCGCAAT
(
4
)
4.6
0.0046
P8 GC+1d culture
AAGCTGAGAG
(
7
)
1.1
0.0011
P8 GC+1d culture
GTGTTTGTGA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TAACTTGTAG
(
6
)
19.9
0.0199
P8 GC+SHH+1d culture
CAAGGGGCAG (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
TGCTCGCAAT
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
AGCTTTGAAA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GATCATAGCT
(
4
)
1.2
0.0012
3T3 fibroblasts
AAGCTGAGAG
(
7
)
3.5
0.0035
3T3 fibroblasts
CAAGGGGCAG (
6
)
3.5
0.0035
3T3 fibroblasts
TAACTTGTAG
(
6
)
3.5
0.0035
3T3 fibroblasts
TGCTCGCAAT
(
4
)
3.5
0.0035
E15 cortex
TAACTTGTAG
(
6
)
14.8
0.0148
E15 cortex
TGCTCGCAAT
(
4
)
4.9
0.0049
P1 cortex
AAGCTGAGAG
(
7
)
4.5
0.0045
P1 cortex
GTGTTTGTGA (
4
)
4.5
0.0045
P1 cortex
TAACTTGTAG
(
6
)
4.5
0.0045
Hypothalamus
TAACTTGTAG
(
6
)
12.7
0.0127
Hypothalamus
CAAGGGGCAG (
6
)
7.2
0.0072
Hypothalamus
GATCATAGCT
(
4
)
7.2
0.0072
E12.5 retina
TAACTTGTAG
(
6
)
22.5
0.0225
E12.5 retina
ATGCAGGGAT
(
6
)
1.9
0.0019
E14.5 retina
TAACTTGTAG
(
6
)
18.2
0.0182
E16.5 retina
TAACTTGTAG
(
6
)
21.7
0.0217
E18.5 retina
TAACTTGTAG
(
6
)
50.9
0.0509
E18.5 retina
GTGTTTGTGA (
4
)
3.6
0.0036
P0.5 retina
TAACTTGTAG
(
6
)
17.7
0.0177
P0.5 retina
CAAGGGGCAG (
6
)
2
0.002
P0.5 retina
TGCTCGCAAT
(
4
)
2
0.002
P2.5 retina
TAACTTGTAG
(
6
)
26.4
0.0264
P2.5 retina
ATGCAGGGAT
(
6
)
5.3
0.0053
P2.5 retina
TGCTCGCAAT
(
4
)
3.5
0.0035
P2.5 retina
CAAGGGGCAG (
6
)
1.8
0.0018
P4.5 retina
TAACTTGTAG
(
6
)
45.6
0.0456
P4.5 retina
ATGCAGGGAT
(
6
)
2
0.002
P4.5 retina
CAAGGGGCAG (
6
)
2
0.002
P4.5 retina
GATCATAGCT
(
4
)
2
0.002
P6.5 retina
TAACTTGTAG
(
6
)
25
0.025
P6.5 retina
TGCTCGCAAT
(
4
)
5
0.005
P6.5 retina
AGCTTTGAAA
(
4
)
3.3
0.0033
P6.5 retina
AAGCTGAGAG
(
7
)
1.7
0.0017
P6.5 retina
ATGCAGGGAT
(
6
)
1.7
0.0017
P10.5 crx- retina
TAACTTGTAG
(
6
)
16.7
0.0167
P10.5 crx- retina
ATGCAGGGAT
(
6
)
1.9
0.0019
P10.5 crx+ retina
TAACTTGTAG
(
6
)
17.3
0.0173
P10.5 crx+ retina
CATTTGTCAG
(
5
)
3.8
0.0038
P10.5 crx+ retina
TGCTCGCAAT
(
4
)
3.8
0.0038
P10.5 crx+ retina
AGCTTTGAAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
CAAGGGGCAG (
6
)
1.9
0.0019
Adult retinal
TAACTTGTAG
(
6
)
11.1
0.0111
Adult retinal
TGCTCGCAAT
(
4
)
3.7
0.0037
Adult retinal
CAAGGGGCAG (
6
)
1.9
0.0019
ONL
TAACTTGTAG
(
6
)
11.5
0.0115
ONL
TGCTCGCAAT
(
4
)
5.7
0.0057
ONL
AAGCTGAGAG
(
7
)
1.9
0.0019
ONL
GATCATAGCT
(
4
)
1.9
0.0019
