Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270186	Rbbp7	retinoblastoma binding protein 7	X		245688
Mm.270186	4932441K18	CXORF15	X		353170
Mm.270186	AI256676	expressed sequence AI256676	X		102881
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAACTTA (9) 6.5 0.0065 P8 Cb GC GCCAGAAAAA (10) 3.3 0.0033 P8 Cb GC AAAGACGTGG (3) 1.6 0.0016 P8 Cb GC AGGAAATGAA (9) 1.6 0.0016 P8 Cb GC CAGATATGGC (5) 1.6 0.0016 P8 Cb GC CATTTTCAGC (6) 1.6 0.0016 P8 Cb GC GTAAATATTT (6) 1.6 0.0016 Cb medulloblastoma AATAAACTTA (9) 16.2 0.0162 Cb medulloblastoma GCCAGAAAAA (10) 13.9 0.0139 Cb medulloblastoma AAAGACGTGG (3) 6.9 0.0069 Cb medulloblastoma AATGCTTGAT (4) 2.3 0.0023 Cb medulloblastoma CAGATATGGC (5) 2.3 0.0023 P8 GC+1d culture AATAAACTTA (9) 3.4 0.0034 P8 GC+1d culture GCCAGAAAAA (10) 3.4 0.0034 P8 GC+1d culture AGGAAATGAA (9) 2.3 0.0023 P8 GC+1d culture AAAGACGTGG (3) 1.1 0.0011 P8 GC+1d culture AATGCTTGAT (4) 1.1 0.0011 P8 GC+1d culture TAGCAATACA (3) 1.1 0.0011 P8 GC+SHH+1d culture GCCAGAAAAA (10) 8.2 0.0082 P8 GC+SHH+1d culture AATAAACTTA (9) 3.5 0.0035 P8 GC+SHH+1d culture AATGCTTGAT (4) 1.2 0.0012 P8 GC+SHH+1d culture AGGAAATGAA (9) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CTCCTTCAGC (4) 7 0.007 3T3 fibroblasts AATAAACTTA (9) 3.5 0.0035 3T3 fibroblasts AATGCTTGAT (4) 3.5 0.0035 E15 cortex AACGAGAAGT (6) 4.9 0.0049 E15 cortex AATGCTTGAT (4) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AGGAAATGAA (9) 4.5 0.0045 Hypothalamus AATAAACTTA (9) 14.5 0.0145 Hypothalamus GCCAGAAAAA (10) 7.2 0.0072 Hypothalamus AAAGACGTGG (3) 3.6 0.0036 Hypothalamus AACGAGAAGT (6) 1.8 0.0018 Hypothalamus AGGAAATGAA (9) 1.8 0.0018 Hypothalamus AGGATATGAA (3) 1.8 0.0018 Hypothalamus GTAAATATTT (6) 1.8 0.0018 E12.5 retina AATAAACTTA (9) 16.9 0.0169 E12.5 retina AATGCTTGAT (4) 3.8 0.0038 E12.5 retina AAAGACGTGG (3) 1.9 0.0019 E12.5 retina CATTTTCAGC (6) 1.9 0.0019 E12.5 retina TAGCAATACA (3) 1.9 0.0019 E14.5 retina AATAAACTTA (9) 5.5 0.0055 E14.5 retina AAAGACGTGG (3) 1.8 0.0018 E14.5 retina AATGCTTGAT (4) 1.8 0.0018 E14.5 retina AGGAAATGAA (9) 1.8 0.0018 E14.5 retina GCCAGAAAAA (10) 1.8 0.0018 E16.5 retina AATAAACTTA (9) 7.2 0.0072 E16.5 retina AATGCTTGAT (4) 7.2 0.0072 E16.5 retina AAAGACGTGG (3) 3.6 0.0036 E16.5 retina AACGAGAAGT (6) 1.8 0.0018 E16.5 retina AGGAAATGAA (9) 1.8 0.0018 E16.5 retina AGGATATGAA (3) 1.8 0.0018 E16.5 retina TAGCAATACA (3) 1.8 0.0018 E18.5 retina AATAAACTTA (9) 7.3 0.0073 E18.5 retina GCCAGAAAAA (10) 3.6 0.0036 E18.5 retina AATGCTTGAT (4) 1.8 0.0018 E18.5 retina AGGATATGAA (3) 1.8 0.0018 E18.5 retina CAGATATGGC (5) 1.8 0.0018 E18.5 retina TAGCAATACA (3) 1.8 0.0018 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AATAAACTTA (9) 2 0.002 P0.5 retina AATGCTTGAT (4) 2 0.002 P0.5 retina AGGAAATGAA (9) 2 0.002 P0.5 retina AGGATATGAA (3) 2 0.002 P0.5 retina CAGATATGGC (5) 2 0.002 P0.5 retina CTCCTTCAGC (4) 2 0.002 P0.5 retina GCCAGAAAAA (10) 2 0.002 P2.5 retina AATAAACTTA (9) 12.3 0.0123 P2.5 retina GCCAGAAAAA (10) 5.3 0.0053 P2.5 retina AGGAAATGAA (9) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TAGCAATACA (3) 1.8 0.0018 P4.5 retina AATAAACTTA (9) 23.8 0.0238 P4.5 retina AGGAAATGAA (9) 5.9 0.0059 P4.5 retina GCCAGAAAAA (10) 5.9 0.0059 P4.5 retina GTAAATATTT (6) 4 0.004 P4.5 retina AAAGACGTGG (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AATAAACTTA (9) 15 0.015 P6.5 retina GCCAGAAAAA (10) 3.3 0.0033 P6.5 retina GTAAATATTT (6) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AAAGACGTGG (3) 1.7 0.0017 P6.5 retina AATGCTTGAT (4) 1.7 0.0017 P6.5 retina CATTTTCAGC (6) 1.7 0.0017 P6.5 retina TAGCAATACA (3) 1.7 0.0017 P10.5 crx- retina AATAAACTTA (9) 3.7 0.0037 P10.5 crx- retina AAAGACGTGG (3) 1.9 0.0019 P10.5 crx+ retina GCCAGAAAAA (10) 15.4 0.0154 P10.5 crx+ retina AATAAACTTA (9) 13.5 0.0135 P10.5 crx+ retina AATGCTTGAT (4) 1.9 0.0019 P10.5 crx+ retina TAGCAATACA (3) 1.9 0.0019 Adult retinal GCCAGAAAAA (10) 5.6 0.0056 Adult retinal AATAAACTTA (9) 3.7 0.0037 Adult retinal AGGAAATGAA (9) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAGCAATAAT (4) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AATAAACTTA (9) 3.8 0.0038 ONL AGGAAATGAA (9) 3.8 0.0038 ONL GCCAGAAAAA (10) 3.8 0.0038 ONL TAGCAATAAT (4) 3.8 0.0038 ONL AATGCTTGAT (4) 1.9 0.0019