| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGAAAGTCCT (3) TTTGATGGAT (5)
| 4.9 | 0.0049 |
| P8 GC+1d culture | GAAGGGCCAA (4) GAATGAAGAA (4) TTTGATGGAT (5)
| 3.3 | 0.0033 |
| P8 GC+SHH+1d culture | GAAGGGCCAA (4) GAATGAAGAA (4) TTTGATGGAT (5)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | GAAGGGCCAA (4)
| 10.5 | 0.0105 |
| E15 cortex | GAAGGGCCAA (4) GGAAAGTCCT (3)
| 9.8 | 0.0098 |
| P1 cortex | GAATGAAGAA (4) GGAAAGTCCT (3)
| 9 | 0.009 |
| E12.5 retina | GAAGGGCCAA (4) GGAAAGTCCT (3)
| 3.8 | 0.0038 |
| E14.5 retina | GAAGGGCCAA (4)
| 1.8 | 0.0018 |
| E16.5 retina | GAATGAAGAA (4) TTTGATGGAT (5)
| 3.6 | 0.0036 |
| E18.5 retina | GAAGGGCCAA (4)
| 1.8 | 0.0018 |
| P0.5 retina | GAAGGGCCAA (4)
| 5.9 | 0.0059 |
| P2.5 retina | GAAGGGCCAA (4) TAATGTGAGG (3) TTTGATGGAT (5)
| 15.8 | 0.0158 |
| P4.5 retina | TAATGTGAGG (3)
| 2 | 0.002 |
| P10.5 crx- retina | GAAGGGCCAA (4)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | GAAGGGCCAA (4) GAATGAAGAA (4)
| 3.8 | 0.0038 |