Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270469	D5Bwg0860e	DNA segment, Chr 5, Brigham & Women's Genetics 0860 expressed	5	5 E1 (5 48.0 cM)	52822
Human Homolog	RIPX[rap2 interacting protein x]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 19 In Situ Hybridization Images

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SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCCTCTTC GCAAAGCTGA (2) GCATAAATTG GCTGCCACCA (2) GTAGACGCAA 14.6 0.0146 Cb medulloblastoma GCAAAGCTGA (2) GCATAAATTG GCTGCCACCA (2) TCCTCCGGCT 13.8 0.0138 P8 GC+1d culture AGCCCTCTTC AGCTCGCCTT AGTCTATGCA ATGAGTCAGC GCATAAATTG GTAGACGCAA TCCTCCGGCT TTTTCCCAAG (2) 28.4 0.0284 P8 GC+SHH+1d culture AGCTCGCCTT GCATAAATTG GCTGCCACCA (2) TCCTCCGGCT 14.1 0.0141 3T3 fibroblasts GCATAAATTG GCTGCCACCA (2) 42.1 0.0421 E15 cortex AGCTCGCCTT GCATAAATTG GCTGCCACCA (2) 34.6 0.0346 P1 cortex AGCTCGCCTT GCTGCCACCA (2) TCCTCCGGCT 18.1 0.0181 Hypothalamus AGTCTATGCA ATGAGTCAGC GCATAAATTG TCCTCCGGCT 9 0.009 E12.5 retina GCATAAATTG 5.6 0.0056 E14.5 retina AGTCTATGCA GCATAAATTG 7.3 0.0073 E16.5 retina AGTCTATGCA GCATAAATTG GCTGCCACCA (2) TCCTCCGGCT TTTTCCCAAG (2) 21.7 0.0217 E18.5 retina GCATAAATTG 9.1 0.0091 P0.5 retina AGTCTATGCA GCATAAATTG GTAGACGCAA 6 0.006 P2.5 retina ATGAGTCAGC GCTGCCACCA (2) GTAGACGCAA 7.1 0.0071 P4.5 retina AGCCCTCTTC AGTCTATGCA GCATAAATTG TTTTCCCAAG (2) 15.9 0.0159 P6.5 retina AGTCTATGCA GCATAAATTG GCTGCCACCA (2) GTAGACGCAA TCCTCCGGCT 20 0.02 P10.5 crx- retina AGTCTATGCA GCATAAATTG TCCTCCGGCT 11.2 0.0112 P10.5 crx+ retina AGCTCGCCTT AGTCTATGCA GCAAAGCTGA (2) GCATAAATTG GTAGACGCAA 15.2 0.0152 Adult retinal AGCCCTCTTC AGCTCGCCTT AGTCTATGCA GCATAAATTG TCCTCCGGCT 26 0.026 ONL AGCCCTCTTC AGCTCGCCTT AGTCTATGCA GCATAAATTG TCCTCCGGCT TTTTCCCAAG (2) 22.9 0.0229