Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27082
Atp6v1h
ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
1
108664
Mm.27082
B230334L07Rik
RIKEN cDNA B230334L07 gene
1
320384
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 22 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACCAGTGGA
(
2
)
GTGCACAACT
(
2
)
11.4
0.0114
Cb medulloblastoma
GACCAGTGGA
(
2
)
20.8
0.0208
P8 GC+1d culture
GACCAGTGGA
(
2
)
GGAAGTGCAG
(
3
)
5.7
0.0057
P8 GC+SHH+1d culture
GACCAGTGGA
(
2
)
3.5
0.0035
3T3 fibroblasts
GACCAGTGGA
(
2
)
10.5
0.0105
E15 cortex
GACCAGTGGA
(
2
)
9.9
0.0099
Hypothalamus
GACCAGTGGA
(
2
)
7.2
0.0072
E12.5 retina
GACCAGTGGA
(
2
)
9.4
0.0094
E14.5 retina
GACCAGTGGA
(
2
)
3.6
0.0036
E16.5 retina
GGAAGTGCAG
(
3
)
1.8
0.0018
E18.5 retina
GACCAGTGGA
(
2
)
1.8
0.0018
P0.5 retina
GACCAGTGGA
(
2
)
7.9
0.0079
P2.5 retina
GACCAGTGGA
(
2
)
1.8
0.0018
P4.5 retina
GACCAGTGGA
(
2
)
4
0.004
P6.5 retina
GACCAGTGGA
(
2
)
GTGCACAACT
(
2
)
8.3
0.0083
P10.5 crx- retina
GACCAGTGGA
(
2
)
9.3
0.0093
P10.5 crx+ retina
GACCAGTGGA
(
2
)
13.5
0.0135
Adult retinal
GACCAGTGGA
(
2
)
5.6
0.0056
ONL
GACCAGTGGA
(
2
)
5.7
0.0057
