Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270975	Rangap1	RAN GTPase activating protein 1	15	15 43.3 cM	19387
Gene Ontology	GTPase activator activity
Human Homolog	RANGAP1[Ran GTPase activating protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 112 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TGCCACCACG (9) 8.2 0.0082 P8 Cb GC TTGGGCCTAC 6.5 0.0065 P8 Cb GC GCCTCTGAAG (2) 3.3 0.0033 P8 Cb GC GCCCCCTGAT (3) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TGCCACCACG (9) 9.2 0.0092 Cb medulloblastoma ATAATACATT (2) 4.6 0.0046 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TTGGGCCTAC 6.8 0.0068 P8 GC+1d culture TGCCACCACG (9) 3.4 0.0034 P8 GC+1d culture TATTCAATCA (4) 2.3 0.0023 P8 GC+1d culture CCTTAATCCC (2) 1.1 0.0011 P8 GC+1d culture CCTTTACTCC (4) 1.1 0.0011 P8 GC+1d culture GTTAAGGGCA 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TTGGGCCTAC 11.7 0.0117 P8 GC+SHH+1d culture TGCCACCACG (9) 8.2 0.0082 P8 GC+SHH+1d culture GGGCCCTCTG (6) 1.2 0.0012 P8 GC+SHH+1d culture GTTAAGGGCA 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts TGCCACCACG (9) 14 0.014 3T3 fibroblasts TTGGGCCTAC 7 0.007 3T3 fibroblasts GCCCCCTGAT (3) 3.5 0.0035 3T3 fibroblasts GTTAAGGGCA 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TGCCACCACG (9) 14.8 0.0148 E15 cortex CCCTTTAATC (5) 9.9 0.0099 E15 cortex GCCCCCTGAT (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TTGGGCCTAC 9.1 0.0091 P1 cortex ATAATACATT (2) 4.5 0.0045 P1 cortex TGGTTCAGGC 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TTGGGCCTAC 5.4 0.0054 Hypothalamus TGCCACCACG (9) 3.6 0.0036 Hypothalamus CCTTAATCCC (2) 1.8 0.0018 Hypothalamus GCCCCCTGAT (3) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TTGGGCCTAC 9.4 0.0094 E12.5 retina CCTTTACTCC (4) 5.6 0.0056 E12.5 retina GTTAAGGGCA 3.8 0.0038 E12.5 retina TGCCACCACG (9) 3.8 0.0038 E12.5 retina ATAATACATT (2) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TTGGGCCTAC 7.3 0.0073 E14.5 retina CCTTAATCCC (2) 3.6 0.0036 E14.5 retina TATTCAATCA (4) 3.6 0.0036 E14.5 retina GCCCCCTGAT (3) 1.8 0.0018 E14.5 retina TATGCAACTA (6) 1.8 0.0018 E14.5 retina TGCCACCACG (9) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TGCCACCACG (9) 9.1 0.0091 E16.5 retina TTGGGCCTAC 3.6 0.0036 E16.5 retina CCTTAATCCC (2) 1.8 0.0018 E16.5 retina CCTTTACTCC (4) 1.8 0.0018 E16.5 retina GCCCCCTGAT (3) 1.8 0.0018 E16.5 retina TGGTTCAGGC 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TTGGGCCTAC 9.1 0.0091 E18.5 retina TGCCACCACG (9) 5.5 0.0055 E18.5 retina GTTAAGGGCA 3.6 0.0036 E18.5 retina ATAATACATT (2) 1.8 0.0018 E18.5 retina TATGCAACTA (6) 1.8 0.0018 E18.5 retina TATTCAATCA (4) 1.8 0.0018 E18.5 retina TGGTTCAGGC 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TTGGGCCTAC 15.7 0.0157 P0.5 retina ATAATACATT (2) 2 0.002 P0.5 retina CCTTTACTCC (4) 2 0.002 P0.5 retina GCCCCCTGAT (3) 2 0.002 P0.5 retina GTTAAGGGCA 2 0.002 P0.5 retina TGCCACCACG (9) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TGCCACCACG (9) 8.8 0.0088 P2.5 retina TTGGGCCTAC 5.3 0.0053 P2.5 retina ATAATACATT (2) 3.5 0.0035 P2.5 retina CCCTTTAATC (5) 1.8 0.0018 P2.5 retina GTTAAGGGCA 1.8 0.0018 P2.5 retina TATTCAATCA (4) 1.8 0.0018 P2.5 retina TGGTTCAGGC 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TTGGGCCTAC 7.9 0.0079 P4.5 retina ATAATACATT (2) 5.9 0.0059 P4.5 retina TGCCACCACG (9) 4 0.004 P4.5 retina CCTTTACTCC (4) 2 0.002 P4.5 retina GCCTCTGAAG (2) 2 0.002 P4.5 retina GGGCCCTCTG (6) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TTGGGCCTAC 8.3 0.0083 P6.5 retina TGCCACCACG (9) 5 0.005 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TATTCAATCA (4) 5.6 0.0056 P10.5 crx- retina TTGGGCCTAC 3.7 0.0037 P10.5 crx- retina GGGCCCTCTG (6) 1.9 0.0019 P10.5 crx- retina TGCCACCACG (9) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TGCCACCACG (9) 5.8 0.0058 P10.5 crx+ retina TTGGGCCTAC 5.8 0.0058 P10.5 crx+ retina GGGCCCTCTG (6) 1.9 0.0019 P10.5 crx+ retina TATGCAACTA (6) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TTGGGCCTAC 11.1 0.0111 Adult retinal TGCCACCACG (9) 7.4 0.0074 Adult retinal CCTTAATCCC (2) 3.7 0.0037 Adult retinal GGGCCCTCTG (6) 1.9 0.0019 Adult retinal TGGTTCAGGC 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL ATAATACATT (2) 5.7 0.0057 ONL CCTTAATCCC (2) 3.8 0.0038 ONL TGCCACCACG (9) 1.9 0.0019 ONL TTGGGCCTAC 1.9 0.0019