Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271174	Skiip	SKI interacting protein	12		66354
Gene Ontology	nucleus | positive regulation of transcription from Pol II promoter | protein binding | receptor activity | transcription coactivator activity | vitamin D receptor binding
Human Homolog	SKIIP[SKI interacting protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGAACTAAG (2) 16.3 0.0163 P8 Cb GC ACCGGAACCT 1.6 0.0016 P8 Cb GC GCTGCAGCAA 1.6 0.0016 Cb medulloblastoma GGGAACTAAG (2) 23.1 0.0231 Cb medulloblastoma AAGGCAAGAA (2) 2.3 0.0023 Cb medulloblastoma ACCGGAACCT 2.3 0.0023 P8 GC+1d culture GGGAACTAAG (2) 14.8 0.0148 P8 GC+1d culture GCTGCAGCAA 2.3 0.0023 P8 GC+1d culture AAGGCAAGAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GGGAACTAAG (2) 22.2 0.0222 P8 GC+SHH+1d culture GCTGCAGCAA 11.7 0.0117 3T3 fibroblasts CCAGTTCGTG 7 0.007 3T3 fibroblasts GGGAACTAAG (2) 3.5 0.0035 E15 cortex GGGAACTAAG (2) 24.7 0.0247 E15 cortex CCAGTTCGTG 14.8 0.0148 P1 cortex GGGAACTAAG (2) 13.6 0.0136 P1 cortex GCTGCAGCAA 4.5 0.0045 Hypothalamus GGGAACTAAG (2) 5.4 0.0054 Hypothalamus GCTGCAGCAA 3.6 0.0036 Hypothalamus TGGCCCAGTA 1.8 0.0018 E12.5 retina GGGAACTAAG (2) 26.3 0.0263 E12.5 retina GCTGCAGCAA 11.3 0.0113 E14.5 retina GGGAACTAAG (2) 14.6 0.0146 E14.5 retina AAGGCAAGAA (2) 1.8 0.0018 E14.5 retina ACCGGAACCT 1.8 0.0018 E14.5 retina CCAGTTCGTG 1.8 0.0018 E14.5 retina TATGGTGATG 1.8 0.0018 E16.5 retina GGGAACTAAG (2) 3.6 0.0036 E16.5 retina AAGGCAAGAA (2) 1.8 0.0018 E18.5 retina GGGAACTAAG (2) 16.4 0.0164 E18.5 retina GCTGCAGCAA 5.5 0.0055 P0.5 retina GCTGCAGCAA 11.8 0.0118 P0.5 retina GGGAACTAAG (2) 7.9 0.0079 P0.5 retina AAGGCAAGAA (2) 2 0.002 P2.5 retina GGGAACTAAG (2) 33.4 0.0334 P2.5 retina GCTGCAGCAA 12.3 0.0123 P2.5 retina TGGCCCAGTA 1.8 0.0018 P4.5 retina GGGAACTAAG (2) 25.8 0.0258 P4.5 retina GCTGCAGCAA 4 0.004 P6.5 retina GGGAACTAAG (2) 20 0.02 P6.5 retina GCTGCAGCAA 5 0.005 P10.5 crx- retina GGGAACTAAG (2) 14.9 0.0149 P10.5 crx- retina GCTGCAGCAA 1.9 0.0019 P10.5 crx+ retina GGGAACTAAG (2) 23.1 0.0231 P10.5 crx+ retina GCTGCAGCAA 1.9 0.0019 P10.5 crx+ retina TATGGTGATG 1.9 0.0019 Adult retinal GGGAACTAAG (2) 11.1 0.0111 Adult retinal TGGCCCAGTA 1.9 0.0019 ONL GGGAACTAAG (2) 5.7 0.0057