Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.271620
Gbf1
golgi-specific brefeldin A-resistance factor 1
19
107338
Mm.271620
C130013I19Rik
RIKEN cDNA C130013I19 gene
19
320029
Mm.271620
D430033H22Rik
RIKEN cDNA D430033H22 gene
19
320461
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCAAATGCTG (
4
)
4.9
0.0049
P8 Cb GC
ATATGGAATA (
6
)
3.3
0.0033
P8 Cb GC
GCAGGCACTG
(
4
)
1.6
0.0016
P8 Cb GC
GGCAAAGGAG
(
8
)
1.6
0.0016
P8 Cb GC
GGCAGGCCTG (
4
)
1.6
0.0016
Cb medulloblastoma
GCAAATGCTG (
4
)
11.6
0.0116
Cb medulloblastoma
TACATATGGA
(
4
)
9.2
0.0092
Cb medulloblastoma
GGCAGGCCTG (
4
)
2.3
0.0023
P8 GC+1d culture
ATATGGAATA (
6
)
4.6
0.0046
P8 GC+1d culture
TACATATGGA
(
4
)
4.6
0.0046
P8 GC+1d culture
GCAAATGCTG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
ATATGGAATA (
6
)
4.7
0.0047
P8 GC+SHH+1d culture
TACATATGGA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
GCAAATGCTG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGCAAAGGAG
(
8
)
1.2
0.0012
P8 GC+SHH+1d culture
GGCAGGCCTG (
4
)
1.2
0.0012
3T3 fibroblasts
GCAGACACAC (
8
)
3.5
0.0035
3T3 fibroblasts
GGCAGGCCTG (
4
)
3.5
0.0035
E15 cortex
ATATGGAATA (
6
)
4.9
0.0049
E15 cortex
GCAGGCACTG
(
4
)
4.9
0.0049
Hypothalamus
GCAAATGCTG (
4
)
7.2
0.0072
Hypothalamus
TACATATGGA
(
4
)
7.2
0.0072
Hypothalamus
ATATGGAATA (
6
)
5.4
0.0054
Hypothalamus
GCAGACACAC (
8
)
1.8
0.0018
E12.5 retina
TACATATGGA
(
4
)
7.5
0.0075
E12.5 retina
ATATGGAATA (
6
)
5.6
0.0056
E14.5 retina
ATATGGAATA (
6
)
5.5
0.0055
E14.5 retina
ACCTCCACCC (
7
)
1.8
0.0018
E14.5 retina
GGCAAAGGAG
(
8
)
1.8
0.0018
E14.5 retina
TACATATGGA
(
4
)
1.8
0.0018
E16.5 retina
GCAAATGCTG (
4
)
9.1
0.0091
E16.5 retina
TACATATGGA
(
4
)
5.4
0.0054
E16.5 retina
ATATGGAATA (
6
)
3.6
0.0036
E16.5 retina
GCAGACACAC (
8
)
1.8
0.0018
E16.5 retina
GCAGGCACTG
(
4
)
1.8
0.0018
E16.5 retina
GGCAAAGGAG
(
8
)
1.8
0.0018
E18.5 retina
ATATGGAATA (
6
)
9.1
0.0091
E18.5 retina
GCAAATGCTG (
4
)
3.6
0.0036
E18.5 retina
GCAGGCACTG
(
4
)
1.8
0.0018
E18.5 retina
GGCCAGAGAA (
4
)
1.8
0.0018
E18.5 retina
TACATATGGA
(
4
)
1.8
0.0018
P0.5 retina
GCAAATGCTG (
4
)
5.9
0.0059
P0.5 retina
ATATGGAATA (
6
)
2
0.002
P0.5 retina
TACATATGGA
(
4
)
2
0.002
P2.5 retina
ATATGGAATA (
6
)
10.6
0.0106
P2.5 retina
TACATATGGA
(
4
)
7
0.007
P2.5 retina
GGCAAAGGAG
(
8
)
1.8
0.0018
P4.5 retina
TACATATGGA
(
4
)
9.9
0.0099
P4.5 retina
ATATGGAATA (
6
)
4
0.004
P4.5 retina
ACCTCCACCC (
7
)
2
0.002
P6.5 retina
ATATGGAATA (
6
)
10
0.01
P6.5 retina
TACATATGGA
(
4
)
6.7
0.0067
P6.5 retina
GCAAATGCTG (
4
)
1.7
0.0017
P10.5 crx- retina
TACATATGGA
(
4
)
9.3
0.0093
P10.5 crx- retina
ACCTCCACCC (
7
)
7.4
0.0074
P10.5 crx- retina
ATATGGAATA (
6
)
7.4
0.0074
P10.5 crx- retina
GCAAATGCTG (
4
)
5.6
0.0056
P10.5 crx+ retina
TACATATGGA
(
4
)
5.8
0.0058
P10.5 crx+ retina
ATATGGAATA (
6
)
3.8
0.0038
P10.5 crx+ retina
GGGCTGCCAC (
6
)
1.9
0.0019
Adult retinal
ATATGGAATA (
6
)
3.7
0.0037
Adult retinal
ACCTCCACCC (
7
)
1.9
0.0019
Adult retinal
GCAGACACAC (
8
)
1.9
0.0019
Adult retinal
TACATATGGA
(
4
)
1.9
0.0019
ONL
GGCCAGAGAA (
4
)
3.8
0.0038
ONL
GGGCTGCCAC (
6
)
3.8
0.0038
ONL
ATATGGAATA (
6
)
1.9
0.0019
ONL
TACATATGGA
(
4
)
1.9
0.0019
