Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271775	Sh3glb1	SH3-domain GRB2-like B1 (endophilin)	3		54673
Gene Ontology	acyltransferase activity | apoptosis | apoptotic program | cytoplasm | cytosol | endocytosis | endoplasmic reticulum | fatty acid binding | induction of apoptosis | lipid binding | lysophosphatidic acid acyltransferase activity | membrane | microsome | mitochondrial membrane | phosphatidic acid biosynthesis | phospholipid biosynthesis | protein binding | transferase activity
Human Homolog	SH3GLB1[SH3-domain GRB2-like endophilin B1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 141 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC ATAAAAAAAA (33) 11.4 0.0114 P8 Cb GC ATATTTCCTC 4.9 0.0049 P8 Cb GC GTGCTAATCA (2) 3.3 0.0033 P8 Cb GC TTTTATTTTT (12) 3.3 0.0033 P8 Cb GC AAAACAAAAA (22) 1.6 0.0016 P8 Cb GC AAAAGAAAAA (21) 1.6 0.0016 P8 Cb GC ACAGGAGTGT (3) 1.6 0.0016 P8 Cb GC AGGAACTGTA (19) 1.6 0.0016 P8 Cb GC GACACAGAGC (8) 1.6 0.0016 P8 Cb GC TTATGGTGAC (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma ATAAAAAAAA (33) 25.4 0.0254 Cb medulloblastoma AAAAGAAAAA (21) 11.6 0.0116 Cb medulloblastoma GACACAGAGC (8) 4.6 0.0046 Cb medulloblastoma AAAACAAAAA (22) 2.3 0.0023 Cb medulloblastoma AAGACCAAGC (4) 2.3 0.0023 Cb medulloblastoma ATATTTCCTC 2.3 0.0023 Cb medulloblastoma GGCTTTACAA (5) 2.3 0.0023 Cb medulloblastoma TTTTATTTTT (12) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture ATAAAAAAAA (33) 5.7 0.0057 P8 GC+1d culture ATATTTCCTC 4.6 0.0046 P8 GC+1d culture AAAACAAAAA (22) 3.4 0.0034 P8 GC+1d culture TTTTATTTTT (12) 3.4 0.0034 P8 GC+1d culture GGCTTTACAA (5) 2.3 0.0023 P8 GC+1d culture GTTAATCCTT 2.3 0.0023 P8 GC+1d culture AAAAGAAAAA (21) 1.1 0.0011 P8 GC+1d culture GTGCTAATCA (2) 1.1 0.0011 P8 GC+1d culture TCTGACCTCT 1.1 0.0011 P8 GC+1d culture TTATGGTGAC (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture ATAAAAAAAA (33) 21.1 0.0211 P8 GC+SHH+1d culture TTTTATTTTT (12) 4.7 0.0047 P8 GC+SHH+1d culture AAAAGAAAAA (21) 3.5 0.0035 P8 GC+SHH+1d culture GTGCTAATCA (2) 3.5 0.0035 P8 GC+SHH+1d culture AAAACAAAAA (22) 2.3 0.0023 P8 GC+SHH+1d culture ATATTTCCTC 2.3 0.0023 P8 GC+SHH+1d culture GTTAATCCTT 2.3 0.0023 P8 GC+SHH+1d culture GGCTTTACAA (5) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GGCTTTACAA (5) 4.9 0.0049 E15 cortex GTGCTAATCA (2) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AGGAACTGTA (19) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus ATAAAAAAAA (33) 7.2 0.0072 Hypothalamus GTGCTAATCA (2) 3.6 0.0036 Hypothalamus TTTTATTTTT (12) 3.6 0.0036 Hypothalamus AAAACAAAAA (22) 1.8 0.0018 Hypothalamus ACAGGAGTGT (3) 1.8 0.0018 Hypothalamus ATATTTCCTC 1.8 0.0018 Hypothalamus TCTGACCTCT 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ATAAAAAAAA (33) 11.3 0.0113 E12.5 retina TTTTATTTTT (12) 7.5 0.0075 E12.5 retina AGGAACTGTA (19) 1.9 0.0019 E12.5 retina ATATTTCCTC 1.9 0.0019 E12.5 retina GTGCTAATCA (2) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina ATAAAAAAAA (33) 16.4 0.0164 E14.5 retina GTGCTAATCA (2) 5.5 0.0055 E14.5 retina TTTTATTTTT (12) 3.6 0.0036 E14.5 retina AAGACCAAGC (4) 1.8 0.0018 E14.5 retina ACACAGGAAG (4) 1.8 0.0018 E14.5 retina AGGAACTGTA (19) 1.8 0.0018 E14.5 retina TCTGACCTCT 1.8 0.0018 E14.5 retina TTATGGTGAC (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina ATAAAAAAAA (33) 5.4 0.0054 E16.5 retina TTTTATTTTT (12) 3.6 0.0036 E16.5 retina ACACAGGAAG (4) 1.8 0.0018 E16.5 retina ATATTTCCTC 1.8 0.0018 E16.5 retina GACACAGAGC (8) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina ATAAAAAAAA (33) 30.9 0.0309 E18.5 retina TTTTATTTTT (12) 12.7 0.0127 E18.5 retina AAAAGAAAAA (21) 5.5 0.0055 E18.5 retina AAGACCAAGC (4) 1.8 0.0018 E18.5 retina ACACAGGAAG (4) 1.8 0.0018 E18.5 retina AGGAACTGTA (19) 1.8 0.0018 E18.5 retina ATATTTCCTC 1.8 0.0018 E18.5 retina GGCTTTACAA (5) 1.8 0.0018 E18.5 retina GTGCTAATCA (2) 1.8 0.0018 E18.5 retina GTTAATCCTT 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TTTTATTTTT (12) 7.9 0.0079 P0.5 retina ATATTTCCTC 5.9 0.0059 P0.5 retina ATAAAAAAAA (33) 2 0.002 P0.5 retina GACACAGAGC (8) 2 0.002 P0.5 retina GTGCTAATCA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina ATAAAAAAAA (33) 14.1 0.0141 P2.5 retina ATATTTCCTC 5.3 0.0053 P2.5 retina TTTTATTTTT (12) 5.3 0.0053 P2.5 retina AAAAGAAAAA (21) 3.5 0.0035 P2.5 retina AGGAACTGTA (19) 3.5 0.0035 P2.5 retina GTGCTAATCA (2) 3.5 0.0035 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina ATAAAAAAAA (33) 21.8 0.0218 P4.5 retina AAAAGAAAAA (21) 9.9 0.0099 P4.5 retina ATATTTCCTC 4 0.004 P4.5 retina GTGCTAATCA (2) 4 0.004 P4.5 retina AAGACCAAGC (4) 2 0.002 P4.5 retina TTTTATTTTT (12) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ATAAAAAAAA (33) 10 0.01 P6.5 retina GTTAATCCTT 3.3 0.0033 P6.5 retina AAAACAAAAA (22) 1.7 0.0017 P6.5 retina AGGAACTGTA (19) 1.7 0.0017 P6.5 retina ATATTTCCTC 1.7 0.0017 P6.5 retina GTGCTAATCA (2) 1.7 0.0017 P6.5 retina TTTTATTTTT (12) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ATAAAAAAAA (33) 5.6 0.0056 P10.5 crx- retina ATATTTCCTC 3.7 0.0037 P10.5 crx- retina AAAACAAAAA (22) 1.9 0.0019 P10.5 crx- retina AAAAGAAAAA (21) 1.9 0.0019 P10.5 crx- retina TTTTATTTTT (12) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TTTTATTTTT (12) 5.8 0.0058 P10.5 crx+ retina AGGAACTGTA (19) 3.8 0.0038 P10.5 crx+ retina ATAAAAAAAA (33) 3.8 0.0038 P10.5 crx+ retina ATATTTCCTC 3.8 0.0038 P10.5 crx+ retina GTGCTAATCA (2) 3.8 0.0038 P10.5 crx+ retina AAAAGAAAAA (21) 1.9 0.0019 P10.5 crx+ retina GGCTTTACAA (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AAAACAAAAA (22) 1.9 0.0019 Adult retinal AAAAGAAAAA (21) 1.9 0.0019 Adult retinal TTATGGTGAC (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AGGAACTGTA (19) 11.5 0.0115 ONL AAAACAAAAA (22) 7.7 0.0077 ONL AAAAGAAAAA (21) 5.7 0.0057 ONL TTTTATTTTT (12) 3.8 0.0038 ONL ACAGGAGTGT (3) 1.9 0.0019 ONL ATAAAAAAAA (33) 1.9 0.0019 ONL ATATTTCCTC 1.9 0.0019 ONL GTGCTAATCA (2) 1.9 0.0019