Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.271814 5730405M06RikRIKEN cDNA 5730405M06 gene 11    320690 
 Mm.271814 A230020K14RikRIKEN cDNA A230020K14 gene 11    319274 
 Mm.271814 Ncor1nuclear receptor co-repressor 1 11  11 B2  20185 
 Gene Ontology DNA binding | nucleus | receptor activity | regulation of transcription, DNA-dependent
 Human Homolog NCOR1[nuclear receptor co-repressor 1]
 Clusters 
   Neighbors    

Total 6 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 160 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGTGGCGCACG (61)13.10.0131
P8 Cb GCCGCCCCATCT (3)4.90.0049
P8 Cb GCGGTATGTTAT (5)4.90.0049
P8 Cb GCAATTAAAAAT (5)3.30.0033
P8 Cb GCGATGAGGAAG (9)3.30.0033
P8 Cb GCAATTAAAAAA (8)1.60.0016
P8 Cb GCCAACAGCTGC (7)1.60.0016
P8 Cb GCCCAGCTTAAC (3)1.60.0016
P8 Cb GCGTGCAGGAGG (18)1.60.0016
Cb medulloblastomaGTGGCGCACG (61)6.90.0069
Cb medulloblastomaAATTAAAAAA (8)4.60.0046
Cb medulloblastomaAATTAAAAAT (5)2.30.0023
Cb medulloblastomaCCTGCCTCCC (8)2.30.0023
Cb medulloblastomaGATGAGGAAG (9)2.30.0023
Cb medulloblastomaGGTATGTTAT (5)2.30.0023
P8 GC+1d cultureGTGGCGCACG (61)6.80.0068
P8 GC+1d cultureGTGCAGGAGG (18)4.60.0046
P8 GC+1d cultureGGTATGTTAT (5)2.30.0023
P8 GC+1d cultureGTCAGTCAAA (4)2.30.0023
P8 GC+1d cultureAATTAAAAAA (8)1.10.0011
P8 GC+1d cultureATGTCTTTAA (8)1.10.0011
P8 GC+1d cultureCGCCCCATCT (3)1.10.0011
P8 GC+1d cultureGTTTTCTTAA (6)1.10.0011
P8 GC+1d cultureTCCAGCAGAA (3)1.10.0011
P8 GC+1d cultureTGGTGGCTGG (6)1.10.0011
P8 GC+SHH+1d cultureCGCCCCATCT (3)2.30.0023
P8 GC+SHH+1d cultureGGTATGTTAT (5)2.30.0023
P8 GC+SHH+1d cultureGTGGCGCACG (61)2.30.0023
P8 GC+SHH+1d cultureAATTAAAAAA (8)1.20.0012
P8 GC+SHH+1d cultureAATTAAAAAT (5)1.20.0012
P8 GC+SHH+1d cultureATAGCCAGGG (5)1.20.0012
P8 GC+SHH+1d cultureCCAGCTTAAC (3)1.20.0012
P8 GC+SHH+1d cultureGAAGCGTGGG (7)1.20.0012
P8 GC+SHH+1d cultureGTCAGTCAAA (4)1.20.0012
P8 GC+SHH+1d cultureTGGGTGTTGA (8)1.20.0012
3T3 fibroblastsGTGGCGCACG (61)63.10.0631
3T3 fibroblastsCGCCCCATCT (3)70.007
3T3 fibroblastsGTGCAGGAGG (18)3.50.0035
E15 cortexGTGGCGCACG (61)113.80.1138
E15 cortexGTGCAGGAGG (18)14.80.0148
E15 cortexCGCCCCATCT (3)9.90.0099
E15 cortexGAAGCGTGGG (7)9.90.0099
E15 cortexTGGTGGCTGG (6)9.90.0099
E15 cortexCCTGCCTCCC (8)4.90.0049
E15 cortexGATGAGGAAG (9)4.90.0049
P1 cortexGTGGCGCACG (61)18.20.0182
P1 cortexCGCCCCATCT (3)4.50.0045
P1 cortexGTCAGTCAAA (4)4.50.0045
HypothalamusGTCAGTCAAA (4)3.60.0036
HypothalamusGTGCAGGAGG (18)3.60.0036
HypothalamusGTGGCGCACG (61)3.60.0036
HypothalamusATAGCCAGGG (5)1.80.0018
HypothalamusCGCCCCATCT (3)1.80.0018
HypothalamusTAAATATAAA (6)1.80.0018
HypothalamusTGGTGGCTGG (6)1.80.0018
E12.5 retinaGTGGCGCACG (61)11.30.0113
E12.5 retinaTGGTGGCTGG (6)5.60.0056
E12.5 retinaAAGCTGCAGG (8)1.90.0019
E12.5 retinaACATACTGGG (3)1.90.0019
E12.5 retinaATGTCTTTAA (8)1.90.0019
E12.5 retinaCAACAGCTGC (7)1.90.0019
E12.5 retinaCGCCCCATCT (3)1.90.0019
E12.5 retinaGGTATGTTAT (5)1.90.0019
E12.5 retinaGTGCAGGAGG (18)1.90.0019
E14.5 retinaGTGGCGCACG (61)29.20.0292
E14.5 retinaAAGCTGCAGG (8)9.10.0091
E14.5 retinaGTGCAGGAGG (18)9.10.0091
E14.5 retinaGATGAGGAAG (9)3.60.0036
E14.5 retinaTGGTGGCTGG (6)3.60.0036
E14.5 retinaATGTCTTTAA (8)1.80.0018
E14.5 retinaCGCCCCATCT (3)1.80.0018
E16.5 retinaGTGGCGCACG (61)25.40.0254
E16.5 retinaTGGTGGCTGG (6)10.90.0109
E16.5 retinaGTGCAGGAGG (18)5.40.0054
E16.5 retinaAATTAAAAAA (8)3.60.0036
E16.5 retinaACATACTGGG (3)3.60.0036
E16.5 retinaCGCCCCATCT (3)3.60.0036
E16.5 retinaGATGAGGAAG (9)3.60.0036
E16.5 retinaGGTATGTTAT (5)3.60.0036
E16.5 retinaTCCAGCAGAA (3)3.60.0036
E16.5 retinaAAGCTGCAGG (8)1.80.0018
E16.5 retinaATAGCCAGGG (5)1.80.0018
E16.5 retinaGTCAGTCAAA (4)1.80.0018
E16.5 retinaTAAATATAAA (6)1.80.0018
E16.5 retinaTGGGTGTTGA (8)1.80.0018
E18.5 retinaAAGCTGCAGG (8)14.60.0146
E18.5 retinaGTGGCGCACG (61)10.90.0109
E18.5 retinaGTGCAGGAGG (18)7.30.0073
E18.5 retinaCAACAGCTGC (7)3.60.0036
E18.5 retinaTAAATATAAA (6)3.60.0036
E18.5 retinaGATGAGGAAG (9)1.80.0018
E18.5 retinaGGTATGTTAT (5)1.80.0018
E18.5 retinaTGGGTGTTGA (8)1.80.0018
P0.5 retinaGTGGCGCACG (61)25.50.0255
P0.5 retinaAAGCTGCAGG (8)21.60.0216
P0.5 retinaCAGGTTTCAA (5)20.002
P0.5 retinaGATGAGGAAG (9)20.002
P0.5 retinaGGTATGTTAT (5)20.002
P2.5 retinaGTGGCGCACG (61)17.60.0176
P2.5 retinaAAGCTGCAGG (8)70.007
P2.5 retinaCGCCCCATCT (3)5.30.0053
P2.5 retinaCAGGTTTCAA (5)3.50.0035
P2.5 retinaGGTATGTTAT (5)3.50.0035
P2.5 retinaGTCAGTCAAA (4)1.80.0018
P2.5 retinaGTGCAGGAGG (18)1.80.0018
P2.5 retinaTGGTGGCTGG (6)1.80.0018
P4.5 retinaGTGGCGCACG (61)17.80.0178
P4.5 retinaAAGCTGCAGG (8)13.90.0139
P4.5 retinaGGTATGTTAT (5)5.90.0059
P4.5 retinaCGCCCCATCT (3)40.004
P4.5 retinaAAAAGGAGAT (4)20.002
P4.5 retinaACATACTGGG (3)20.002
P4.5 retinaATACGAAGTC (3)20.002
P4.5 retinaCCAGCTTAAC (3)20.002
P4.5 retinaCCTGCCTCCC (8)20.002
P4.5 retinaGTGCAGGAGG (18)20.002
P4.5 retinaTGGTGGCTGG (6)20.002
P6.5 retinaGTGGCGCACG (61)38.30.0383
P6.5 retinaAAGCTGCAGG (8)8.30.0083
P6.5 retinaGTGCAGGAGG (18)50.005
P6.5 retinaGGTATGTTAT (5)3.30.0033
P6.5 retinaAAAAGGAGAT (4)1.70.0017
P6.5 retinaCAACAGCTGC (7)1.70.0017
P6.5 retinaCCAGCTTAAC (3)1.70.0017
P6.5 retinaGTCAGTCAAA (4)1.70.0017
P6.5 retinaTGGTGGCTGG (6)1.70.0017
P10.5 crx- retinaGTGGCGCACG (61)130.013
P10.5 crx- retinaCGCCCCATCT (3)3.70.0037
P10.5 crx- retinaGGTATGTTAT (5)3.70.0037
P10.5 crx- retinaAAGCTGCAGG (8)1.90.0019
P10.5 crx- retinaATACGAAGTC (3)1.90.0019
P10.5 crx- retinaCCAGCTTAAC (3)1.90.0019
P10.5 crx+ retinaGTGGCGCACG (61)32.70.0327
P10.5 crx+ retinaCCTGCCTCCC (8)3.80.0038
P10.5 crx+ retinaAAAAGGAGAT (4)1.90.0019
P10.5 crx+ retinaATACGAAGTC (3)1.90.0019
P10.5 crx+ retinaCGCCCCATCT (3)1.90.0019
P10.5 crx+ retinaGATGAGGAAG (9)1.90.0019
P10.5 crx+ retinaGTCAGTCAAA (4)1.90.0019
P10.5 crx+ retinaGTGCAGGAGG (18)1.90.0019
P10.5 crx+ retinaTGGTGGCTGG (6)1.90.0019
Adult retinalGTGGCGCACG (61)22.20.0222
Adult retinalAAGCTGCAGG (8)9.30.0093
Adult retinalGTGCAGGAGG (18)5.60.0056
Adult retinalCCAGCTTAAC (3)3.70.0037
Adult retinalCGCCCCATCT (3)3.70.0037
Adult retinalATAGCCAGGG (5)1.90.0019
Adult retinalATGTCTTTAA (8)1.90.0019
Adult retinalGATGAGGAAG (9)1.90.0019
Adult retinalGGTATGTTAT (5)1.90.0019
Adult retinalGTCAGTCAAA (4)1.90.0019
Adult retinalTAAATATAAA (6)1.90.0019
Adult retinalTGGTGGCTGG (6)1.90.0019
ONLGTGGCGCACG (61)230.023
ONLAAGCTGCAGG (8)3.80.0038
ONLAATTAAAAAA (8)3.80.0038
ONLGTGCAGGAGG (18)3.80.0038
ONLGTTTTCTTAA (6)3.80.0038
ONLGTCAGTCAAA (4)1.90.0019
ONLTGGTGGCTGG (6)1.90.0019