Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271814	5730405M06Rik	RIKEN cDNA 5730405M06 gene	11		320690
Mm.271814	A230020K14Rik	RIKEN cDNA A230020K14 gene	11		319274
Mm.271814	Ncor1	nuclear receptor co-repressor 1	11	11 B2	20185
Gene Ontology	DNA binding | nucleus | receptor activity | regulation of transcription, DNA-dependent
Human Homolog	NCOR1[nuclear receptor co-repressor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCCCATCT (3) 4.9 0.0049 P8 Cb GC GGTATGTTAT (5) 4.9 0.0049 P8 Cb GC AATTAAAAAT (4) 3.3 0.0033 P8 Cb GC GATGAGGAAG (5) 3.3 0.0033 P8 Cb GC CCAGCTTAAC (3) 1.6 0.0016 Cb medulloblastoma AATTAAAAAT (4) 2.3 0.0023 Cb medulloblastoma GATGAGGAAG (5) 2.3 0.0023 Cb medulloblastoma GGTATGTTAT (5) 2.3 0.0023 P8 GC+1d culture GGTATGTTAT (5) 2.3 0.0023 P8 GC+1d culture ATGTCTTTAA (3) 1.1 0.0011 P8 GC+1d culture CGCCCCATCT (3) 1.1 0.0011 P8 GC+SHH+1d culture CGCCCCATCT (3) 2.3 0.0023 P8 GC+SHH+1d culture GGTATGTTAT (5) 2.3 0.0023 P8 GC+SHH+1d culture AATTAAAAAT (4) 1.2 0.0012 P8 GC+SHH+1d culture CCAGCTTAAC (3) 1.2 0.0012 3T3 fibroblasts CGCCCCATCT (3) 7 0.007 E15 cortex CGCCCCATCT (3) 9.9 0.0099 E15 cortex GATGAGGAAG (5) 4.9 0.0049 P1 cortex CGCCCCATCT (3) 4.5 0.0045 Hypothalamus CGCCCCATCT (3) 1.8 0.0018 E12.5 retina ACATACTGGG (3) 1.9 0.0019 E12.5 retina ATGTCTTTAA (3) 1.9 0.0019 E12.5 retina CGCCCCATCT (3) 1.9 0.0019 E12.5 retina GGTATGTTAT (5) 1.9 0.0019 E14.5 retina GATGAGGAAG (5) 3.6 0.0036 E14.5 retina ATGTCTTTAA (3) 1.8 0.0018 E14.5 retina CGCCCCATCT (3) 1.8 0.0018 E16.5 retina ACATACTGGG (3) 3.6 0.0036 E16.5 retina CGCCCCATCT (3) 3.6 0.0036 E16.5 retina GATGAGGAAG (5) 3.6 0.0036 E16.5 retina GGTATGTTAT (5) 3.6 0.0036 E18.5 retina GATGAGGAAG (5) 1.8 0.0018 E18.5 retina GGTATGTTAT (5) 1.8 0.0018 P0.5 retina CAGGTTTCAA (5) 2 0.002 P0.5 retina GATGAGGAAG (5) 2 0.002 P0.5 retina GGTATGTTAT (5) 2 0.002 P2.5 retina CGCCCCATCT (3) 5.3 0.0053 P2.5 retina CAGGTTTCAA (5) 3.5 0.0035 P2.5 retina GGTATGTTAT (5) 3.5 0.0035 P4.5 retina GGTATGTTAT (5) 5.9 0.0059 P4.5 retina CGCCCCATCT (3) 4 0.004 P4.5 retina AAAAGGAGAT (4) 2 0.002 P4.5 retina ACATACTGGG (3) 2 0.002 P4.5 retina ATACGAAGTC (3) 2 0.002 P4.5 retina CCAGCTTAAC (3) 2 0.002 P6.5 retina GGTATGTTAT (5) 3.3 0.0033 P6.5 retina AAAAGGAGAT (4) 1.7 0.0017 P6.5 retina CCAGCTTAAC (3) 1.7 0.0017 P10.5 crx- retina CGCCCCATCT (3) 3.7 0.0037 P10.5 crx- retina GGTATGTTAT (5) 3.7 0.0037 P10.5 crx- retina ATACGAAGTC (3) 1.9 0.0019 P10.5 crx- retina CCAGCTTAAC (3) 1.9 0.0019 P10.5 crx+ retina AAAAGGAGAT (4) 1.9 0.0019 P10.5 crx+ retina ATACGAAGTC (3) 1.9 0.0019 P10.5 crx+ retina CGCCCCATCT (3) 1.9 0.0019 P10.5 crx+ retina GATGAGGAAG (5) 1.9 0.0019 Adult retinal CCAGCTTAAC (3) 3.7 0.0037 Adult retinal CGCCCCATCT (3) 3.7 0.0037 Adult retinal ATGTCTTTAA (3) 1.9 0.0019 Adult retinal GATGAGGAAG (5) 1.9 0.0019 Adult retinal GGTATGTTAT (5) 1.9 0.0019