Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271891	Snx1	sorting nexin 1	9		56440
Gene Ontology	Golgi apparatus | intracellular protein transport | intracellular signaling cascade | protein transport | protein transporter activity | transport
Human Homolog	SNX1[sorting nexin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 26 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma AAAGATTATG 4.6 0.0046 Cb medulloblastoma GCACCATCAG 2.3 0.0023 P8 GC+1d culture AAAGATTATG 11.4 0.0114 P8 GC+SHH+1d culture AAAGATTATG 9.4 0.0094 3T3 fibroblasts GCACCATCAG 3.5 0.0035 E15 cortex GCACCATCAG 4.9 0.0049 Hypothalamus AAAGATTATG 7.2 0.0072 Hypothalamus GCACCATCAG 3.6 0.0036 E12.5 retina AAAGATTATG 11.3 0.0113 E14.5 retina AAAGATTATG 12.8 0.0128 E16.5 retina AAAGATTATG 18.1 0.0181 E16.5 retina GCACCATCAG 1.8 0.0018 E18.5 retina AAAGATTATG 20 0.02 P0.5 retina AAAGATTATG 3.9 0.0039 P2.5 retina AAAGATTATG 12.3 0.0123 P4.5 retina AAAGATTATG 11.9 0.0119 P4.5 retina GCACCATCAG 4 0.004 P6.5 retina AAAGATTATG 8.3 0.0083 P6.5 retina GCACCATCAG 1.7 0.0017 P10.5 crx- retina TGTGGTGGGA 3.7 0.0037 P10.5 crx- retina AAAGATTATG 1.9 0.0019 P10.5 crx+ retina AAAGATTATG 5.8 0.0058 P10.5 crx+ retina TGTGGTGGGA 5.8 0.0058 Adult retinal AAAGATTATG 1.9 0.0019 ONL AAAGATTATG 5.7 0.0057 ONL TGTGGTGGGA 1.9 0.0019