Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.271980
Gprasp1
G protein-coupled receptor associated sorting protein 1
X
67298
Mm.271980
E430010N07Rik
RIKEN cDNA E430010N07 gene
X
399572
Mm.271980
AW556585
expressed sequence AW556585
X
97620
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 103 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGATCAAGA (
18
)
55.5
0.0555
P8 Cb GC
ACACTTGTTG
(
4
)
3.3
0.0033
P8 Cb GC
ACTGCCCTCT
(
7
)
1.6
0.0016
P8 Cb GC
CCCAAAGAGT (
10
)
1.6
0.0016
P8 Cb GC
TGGTTCTCTG
(
4
)
1.6
0.0016
Cb medulloblastoma
TGGTTCTCTG
(
4
)
18.5
0.0185
Cb medulloblastoma
AAGATCAAGA (
18
)
13.9
0.0139
Cb medulloblastoma
ACACTTGTTG
(
4
)
2.3
0.0023
Cb medulloblastoma
CCCAAAGAGT (
10
)
2.3
0.0023
Cb medulloblastoma
GCAGGAGCTG (
6
)
2.3
0.0023
Cb medulloblastoma
TGTTTTCAGT (
3
)
2.3
0.0023
P8 GC+1d culture
AAGATCAAGA (
18
)
24
0.024
P8 GC+1d culture
ACACTTGTTG
(
4
)
2.3
0.0023
P8 GC+1d culture
AAACCTTGTT (
5
)
1.1
0.0011
P8 GC+1d culture
ACTGGGGCAG (
5
)
1.1
0.0011
P8 GC+1d culture
GATGTGGGTG (
13
)
1.1
0.0011
P8 GC+1d culture
TGGTTCTCTG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGATCAAGA (
18
)
17.6
0.0176
P8 GC+SHH+1d culture
TGGTTCTCTG
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
AAACCTTGTT (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
ACACTTGTTG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CCCAAAGAGT (
10
)
1.2
0.0012
3T3 fibroblasts
AAGATCAAGA (
18
)
56.1
0.0561
3T3 fibroblasts
ATTGGCTCTA
(
4
)
3.5
0.0035
3T3 fibroblasts
GATGTGGGTG (
13
)
3.5
0.0035
E15 cortex
AAGATCAAGA (
18
)
94
0.094
E15 cortex
ACTGCCCTCT
(
7
)
9.9
0.0099
E15 cortex
TGGTTCTCTG
(
4
)
9.9
0.0099
E15 cortex
ATTGGCTCTA
(
4
)
4.9
0.0049
E15 cortex
CCCAAAGAGT (
10
)
4.9
0.0049
P1 cortex
AAGATCAAGA (
18
)
63.6
0.0636
P1 cortex
ACACTTGTTG
(
4
)
27.3
0.0273
P1 cortex
AAACCTTGTT (
5
)
4.5
0.0045
P1 cortex
AAAGATCCTT (
4
)
4.5
0.0045
P1 cortex
ATGGGCTGTG (
6
)
4.5
0.0045
P1 cortex
CCCAAAGAGT (
10
)
4.5
0.0045
P1 cortex
TGGTTCTCTG
(
4
)
4.5
0.0045
Hypothalamus
TGGTTCTCTG
(
4
)
36.2
0.0362
Hypothalamus
ACACTTGTTG
(
4
)
25.4
0.0254
Hypothalamus
TGTTTTCAGT (
3
)
9.1
0.0091
Hypothalamus
AAGATCAAGA (
18
)
5.4
0.0054
Hypothalamus
ACTGGGGCAG (
5
)
3.6
0.0036
Hypothalamus
AAACCTTGTT (
5
)
1.8
0.0018
Hypothalamus
AAATGCAGAA
(
3
)
1.8
0.0018
Hypothalamus
GCAGGAGCTG (
6
)
1.8
0.0018
E12.5 retina
AAGATCAAGA (
18
)
50.7
0.0507
E12.5 retina
TGGTTCTCTG
(
4
)
5.6
0.0056
E12.5 retina
ACACTTGTTG
(
4
)
3.8
0.0038
E12.5 retina
ATGGGCTGTG (
6
)
1.9
0.0019
E12.5 retina
CCCAAAGAGT (
10
)
1.9
0.0019
E14.5 retina
AAGATCAAGA (
18
)
7.3
0.0073
E14.5 retina
TGGTTCTCTG
(
4
)
7.3
0.0073
E14.5 retina
ACACTTGTTG
(
4
)
3.6
0.0036
E14.5 retina
ACTGCCTTTT (
5
)
3.6
0.0036
E14.5 retina
CCCAAAGAGT (
10
)
1.8
0.0018
E16.5 retina
ACACTTGTTG
(
4
)
14.5
0.0145
E16.5 retina
AAGATCAAGA (
18
)
7.2
0.0072
E16.5 retina
CCCAAAGAGT (
10
)
3.6
0.0036
E16.5 retina
TGGTTCTCTG
(
4
)
3.6
0.0036
E16.5 retina
ACTGCCTTTT (
5
)
1.8
0.0018
E16.5 retina
ACTGGGGCAG (
5
)
1.8
0.0018
E16.5 retina
GCAGGAGCTG (
6
)
1.8
0.0018
E18.5 retina
TGGTTCTCTG
(
4
)
20
0.02
E18.5 retina
AAGATCAAGA (
18
)
7.3
0.0073
E18.5 retina
ACACTTGTTG
(
4
)
1.8
0.0018
E18.5 retina
CCCAAAGAGT (
10
)
1.8
0.0018
P0.5 retina
AAGATCAAGA (
18
)
27.5
0.0275
P0.5 retina
TGGTTCTCTG
(
4
)
7.9
0.0079
P0.5 retina
ACACTTGTTG
(
4
)
3.9
0.0039
P0.5 retina
AAAGATCCTT (
4
)
2
0.002
P2.5 retina
AAGATCAAGA (
18
)
5.3
0.0053
P2.5 retina
ACACTTGTTG
(
4
)
5.3
0.0053
P2.5 retina
TGGTTCTCTG
(
4
)
3.5
0.0035
P2.5 retina
AAATGCAGAA
(
3
)
1.8
0.0018
P4.5 retina
AAGATCAAGA (
18
)
11.9
0.0119
P4.5 retina
TGGTTCTCTG
(
4
)
9.9
0.0099
P4.5 retina
ACACTTGTTG
(
4
)
5.9
0.0059
P4.5 retina
CCCAAAGAGT (
10
)
4
0.004
P4.5 retina
ACTGCCCTCT
(
7
)
2
0.002
P4.5 retina
GATGTGGGTG (
13
)
2
0.002
P6.5 retina
AAGATCAAGA (
18
)
6.7
0.0067
P6.5 retina
TGGTTCTCTG
(
4
)
5
0.005
P6.5 retina
ACACTTGTTG
(
4
)
3.3
0.0033
P10.5 crx- retina
ACACTTGTTG
(
4
)
46.4
0.0464
P10.5 crx- retina
TGGTTCTCTG
(
4
)
13
0.013
P10.5 crx- retina
CCCAAAGAGT (
10
)
3.7
0.0037
P10.5 crx- retina
AAGATCAAGA (
18
)
1.9
0.0019
P10.5 crx+ retina
ACACTTGTTG
(
4
)
17.3
0.0173
P10.5 crx+ retina
TGGTTCTCTG
(
4
)
13.5
0.0135
P10.5 crx+ retina
AAGATCAAGA (
18
)
11.5
0.0115
P10.5 crx+ retina
ACTGCCCTCT
(
7
)
1.9
0.0019
Adult retinal
ACACTTGTTG
(
4
)
7.4
0.0074
Adult retinal
TGGTTCTCTG
(
4
)
5.6
0.0056
Adult retinal
AAGATCAAGA (
18
)
3.7
0.0037
Adult retinal
AAATGCAGAA
(
3
)
1.9
0.0019
Adult retinal
ATTGGCTCTA
(
4
)
1.9
0.0019
Adult retinal
TGTTTTCAGT (
3
)
1.9
0.0019
ONL
AAGATCAAGA (
18
)
5.7
0.0057
ONL
AAACCTTGTT (
5
)
1.9
0.0019
ONL
AAAGATCCTT (
4
)
1.9
0.0019
ONL
ACACTTGTTG
(
4
)
1.9
0.0019
ONL
CCCAAAGAGT (
10
)
1.9
0.0019
ONL
TGGTTCTCTG
(
4
)
1.9
0.0019
