Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271986	5330414D10Rik	RIKEN cDNA 5330414D10 gene	2	2 H4	245867
Gene Ontology	protein modification | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | S-adenosylmethionine-dependent methyltransferase activity
Human Homolog	C20orf36[chromosome 20 open reading frame 36]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma GAACTTAAAG 11.6 0.0116 P8 GC+1d culture CAGACTATAA 4.6 0.0046 P8 GC+1d culture GAACTTAAAG 3.4 0.0034 P8 GC+SHH+1d culture GAACTTAAAG 5.9 0.0059 P8 GC+SHH+1d culture ATGTCTGCTC (2) 1.2 0.0012 P8 GC+SHH+1d culture CAGACTATAA 1.2 0.0012 P8 GC+SHH+1d culture CTCTAACTTG 1.2 0.0012 3T3 fibroblasts CTCTAACTTG 3.5 0.0035 P1 cortex ACTTTAAATA (3) 4.5 0.0045 Hypothalamus GAACTTAAAG 7.2 0.0072 Hypothalamus ATGTCTGCTC (2) 1.8 0.0018 E12.5 retina GAACTTAAAG 5.6 0.0056 E12.5 retina CTCTAACTTG 1.9 0.0019 E14.5 retina GAACTTAAAG 5.5 0.0055 E14.5 retina ATGTCTGCTC (2) 3.6 0.0036 E14.5 retina CTCTAACTTG 1.8 0.0018 E16.5 retina CAGACTATAA 1.8 0.0018 E16.5 retina GAACTTAAAG 1.8 0.0018 E18.5 retina GAACTTAAAG 3.6 0.0036 P0.5 retina GAACTTAAAG 3.9 0.0039 P0.5 retina ATGTCTGCTC (2) 2 0.002 P0.5 retina CTCTAACTTG 2 0.002 P2.5 retina GAACTTAAAG 14.1 0.0141 P2.5 retina CAGACTATAA 1.8 0.0018 P2.5 retina CTCTAACTTG 1.8 0.0018 P4.5 retina GAACTTAAAG 19.8 0.0198 P4.5 retina CAGACTATAA 11.9 0.0119 P6.5 retina GAACTTAAAG 20 0.02 P6.5 retina CAGACTATAA 8.3 0.0083 P6.5 retina CTCTAACTTG 3.3 0.0033 P6.5 retina ACTTTAAATA (3) 1.7 0.0017 P10.5 crx- retina GAACTTAAAG 18.6 0.0186 P10.5 crx- retina CTCTAACTTG 9.3 0.0093 P10.5 crx- retina CAGACTATAA 3.7 0.0037 P10.5 crx- retina ACTTTAAATA (3) 1.9 0.0019 P10.5 crx+ retina GAACTTAAAG 13.5 0.0135 P10.5 crx+ retina CAGACTATAA 7.7 0.0077 P10.5 crx+ retina AGAATTTTCG 3.8 0.0038 P10.5 crx+ retina CTCTAACTTG 1.9 0.0019 Adult retinal GAACTTAAAG 29.6 0.0296 Adult retinal CTCTAACTTG 9.3 0.0093 Adult retinal CAGACTATAA 3.7 0.0037 ONL GAACTTAAAG 47.9 0.0479 ONL CTCTAACTTG 5.7 0.0057 ONL ACTTTAAATA (3) 1.9 0.0019 ONL AGAATTTTCG 1.9 0.0019 ONL CAGACTATAA 1.9 0.0019