Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271997	Appbp2	amyloid beta precursor protein (cytoplasmic tail) binding protein 2	11		66884
Gene Ontology	cytoplasmic vesicle membrane | intracellular transport | membrane | microtubule binding | nucleus | protein transport | transport
Human Homolog	APPBP2[amyloid beta precursor protein (cytoplasmic tail) binding protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAAATTGTT (2) 13.1 0.0131 P8 Cb GC CAGGCAAAAC (40) 11.4 0.0114 P8 Cb GC TGCCGCGTGT (3) 6.5 0.0065 P8 Cb GC GGAGGCTGAG (2) 1.6 0.0016 P8 Cb GC GGCCAGCAAG (2) 1.6 0.0016 P8 Cb GC GTGACTAAAA 1.6 0.0016 P8 Cb GC TTTGTATGTC (4) 1.6 0.0016 Cb medulloblastoma GGCCAGCAAG (2) 13.9 0.0139 Cb medulloblastoma CAGGCAAAAC (40) 4.6 0.0046 Cb medulloblastoma TAACAAAAGA 4.6 0.0046 Cb medulloblastoma GGAGGCTGAA (3) 2.3 0.0023 Cb medulloblastoma GTAAATTGTT (2) 2.3 0.0023 Cb medulloblastoma GTACTGGTAC 2.3 0.0023 Cb medulloblastoma TGCCGCGTGT (3) 2.3 0.0023 Cb medulloblastoma TTTTTCAGAA (4) 2.3 0.0023 P8 GC+1d culture GTAAATTGTT (2) 6.8 0.0068 P8 GC+1d culture CAGGCAAAAC (40) 5.7 0.0057 P8 GC+1d culture TGCCGCGTGT (3) 3.4 0.0034 P8 GC+1d culture GGCCAGCAAG (2) 2.3 0.0023 P8 GC+1d culture TTTGTATGTC (4) 2.3 0.0023 P8 GC+1d culture TTTTTCAGAA (4) 2.3 0.0023 P8 GC+1d culture ATGAGATGCT (5) 1.1 0.0011 P8 GC+SHH+1d culture CAGGCAAAAC (40) 11.7 0.0117 P8 GC+SHH+1d culture GGCCAGCAAG (2) 2.3 0.0023 P8 GC+SHH+1d culture TGCCGCGTGT (3) 2.3 0.0023 P8 GC+SHH+1d culture TTTTTCAGAA (4) 2.3 0.0023 P8 GC+SHH+1d culture TTTGTATGTC (4) 1.2 0.0012 3T3 fibroblasts CAGGCAAAAC (40) 10.5 0.0105 3T3 fibroblasts GGCCAGCAAG (2) 7 0.007 3T3 fibroblasts GGAGGCTGAA (3) 3.5 0.0035 3T3 fibroblasts GGAGGCTGAG (2) 3.5 0.0035 3T3 fibroblasts GGCTGGCGAG (2) 3.5 0.0035 E15 cortex TGCCGCGTGT (3) 9.9 0.0099 E15 cortex CAGGCAAAAC (40) 4.9 0.0049 P1 cortex CAGGCAAAAC (40) 9.1 0.0091 Hypothalamus GGCCAGCAAG (2) 7.2 0.0072 Hypothalamus CAGGCAAAAC (40) 5.4 0.0054 Hypothalamus CTCATTTATT (3) 3.6 0.0036 Hypothalamus GGAGGCTGAA (3) 1.8 0.0018 Hypothalamus GTAAATTGTT (2) 1.8 0.0018 Hypothalamus GTGACTAAAA 1.8 0.0018 Hypothalamus TGCCGCGTGT (3) 1.8 0.0018 E12.5 retina CAGGCAAAAC (40) 20.7 0.0207 E12.5 retina GGCCAGCAAG (2) 16.9 0.0169 E12.5 retina GTAAATTGTT (2) 3.8 0.0038 E12.5 retina GTGACTAAAA 1.9 0.0019 E12.5 retina TGCCGCGTGT (3) 1.9 0.0019 E14.5 retina CAGGCAAAAC (40) 12.8 0.0128 E14.5 retina GGCCAGCAAG (2) 3.6 0.0036 E14.5 retina ATGAGATGCT (5) 1.8 0.0018 E14.5 retina GTACTGGTAC 1.8 0.0018 E16.5 retina CAGGCAAAAC (40) 9.1 0.0091 E16.5 retina TTTTTCAGAA (4) 5.4 0.0054 E16.5 retina GTAAATTGTT (2) 3.6 0.0036 E16.5 retina GGCCAGCAAG (2) 1.8 0.0018 E16.5 retina GTACTGGTAC 1.8 0.0018 E18.5 retina CAGGCAAAAC (40) 12.7 0.0127 E18.5 retina GGCCAGCAAG (2) 5.5 0.0055 E18.5 retina GTAAATTGTT (2) 3.6 0.0036 P0.5 retina CAGGCAAAAC (40) 13.7 0.0137 P0.5 retina GGCCAGCAAG (2) 11.8 0.0118 P0.5 retina AAGTCAGTCT (5) 2 0.002 P0.5 retina GTGACTAAAA 2 0.002 P0.5 retina TAACAAAAGA 2 0.002 P0.5 retina TGCCGCGTGT (3) 2 0.002 P2.5 retina CAGGCAAAAC (40) 24.6 0.0246 P2.5 retina GGCCAGCAAG (2) 8.8 0.0088 P2.5 retina TGCCGCGTGT (3) 3.5 0.0035 P2.5 retina CTCATTTATT (3) 1.8 0.0018 P4.5 retina CAGGCAAAAC (40) 13.9 0.0139 P4.5 retina GGCCAGCAAG (2) 7.9 0.0079 P4.5 retina GTAAATTGTT (2) 4 0.004 P4.5 retina TAACAAAAGA 4 0.004 P4.5 retina TGCCGCGTGT (3) 4 0.004 P4.5 retina GTGACTAAAA 2 0.002 P4.5 retina TTTTTCAGAA (4) 2 0.002 P6.5 retina CAGGCAAAAC (40) 16.7 0.0167 P6.5 retina GGCCAGCAAG (2) 5 0.005 P6.5 retina GGAGGCTGAA (3) 3.3 0.0033 P6.5 retina TTTTTCAGAA (4) 3.3 0.0033 P6.5 retina TGCCGCGTGT (3) 1.7 0.0017 P10.5 crx- retina CAGGCAAAAC (40) 11.1 0.0111 P10.5 crx- retina GGCCAGCAAG (2) 11.1 0.0111 P10.5 crx- retina GTAAATTGTT (2) 3.7 0.0037 P10.5 crx- retina AAGTCAGTCT (5) 1.9 0.0019 P10.5 crx- retina GGAGGCTGAA (3) 1.9 0.0019 P10.5 crx- retina GGCTGGCGAG (2) 1.9 0.0019 P10.5 crx- retina TAACAAAAGA 1.9 0.0019 P10.5 crx- retina TGCCGCGTGT (3) 1.9 0.0019 P10.5 crx- retina TTTTTCAGAA (4) 1.9 0.0019 P10.5 crx+ retina CAGGCAAAAC (40) 13.5 0.0135 P10.5 crx+ retina GGCCAGCAAG (2) 9.6 0.0096 P10.5 crx+ retina GTAAATTGTT (2) 5.8 0.0058 P10.5 crx+ retina GGAGGCTGAG (2) 3.8 0.0038 P10.5 crx+ retina TGCCGCGTGT (3) 3.8 0.0038 P10.5 crx+ retina GGCTGGCGAG (2) 1.9 0.0019 Adult retinal CAGGCAAAAC (40) 11.1 0.0111 Adult retinal GTGACTAAAA 1.9 0.0019 ONL CAGGCAAAAC (40) 34.5 0.0345 ONL AAGTCAGTCT (5) 1.9 0.0019 ONL GTACTGGTAC 1.9 0.0019 ONL TTTGTATGTC (4) 1.9 0.0019 ONL TTTTTCAGAA (4) 1.9 0.0019