Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272130	Pscd2	pleckstrin homology, Sec7 and coiled-coil domains 2	7		19158
Gene Ontology	cytoplasm | guanyl-nucleotide exchange factor activity | plasma membrane | protein binding | regulation of cell adhesion
Human Homolog	PSCD2[pleckstrin homology, Sec7 and coiled-coil domains 2 (cytohesin-2)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGGTAATCT (3) 24.5 0.0245 P8 Cb GC TTGGTAATTT (4) 3.3 0.0033 P8 Cb GC ACCAACCGTC (3) 1.6 0.0016 P8 Cb GC GACCCCAAAA (7) 1.6 0.0016 P8 Cb GC TGGTTCCCCT (3) 1.6 0.0016 P8 Cb GC TTAATTACAA 1.6 0.0016 Cb medulloblastoma TTGGTAATCT (3) 13.9 0.0139 Cb medulloblastoma GACCCCAAAA (7) 4.6 0.0046 Cb medulloblastoma ACCAACCGTC (3) 2.3 0.0023 P8 GC+1d culture TTGGTAATCT (3) 25.1 0.0251 P8 GC+1d culture GACCCCAAAA (7) 3.4 0.0034 P8 GC+1d culture GTGTACCGAA 1.1 0.0011 P8 GC+SHH+1d culture TTGGTAATCT (3) 35.1 0.0351 P8 GC+SHH+1d culture GACCCCAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture GTGTACCGAA 1.2 0.0012 P8 GC+SHH+1d culture TTAATTACAA 1.2 0.0012 E15 cortex GACCCCAAAA (7) 4.9 0.0049 P1 cortex GTGTACCGAA 4.5 0.0045 P1 cortex TTGGGTAATC (3) 4.5 0.0045 P1 cortex TTGGTAATCT (3) 4.5 0.0045 Hypothalamus TTGGTAATCT (3) 12.7 0.0127 Hypothalamus GACCCCAAAA (7) 3.6 0.0036 Hypothalamus TTAATTACAA 1.8 0.0018 Hypothalamus TTGGTAATTT (4) 1.8 0.0018 E12.5 retina TTGGTAATCT (3) 18.8 0.0188 E12.5 retina GTGTACCGAA 3.8 0.0038 E12.5 retina GACCCCAAAA (7) 1.9 0.0019 E14.5 retina TTGGTAATCT (3) 23.7 0.0237 E14.5 retina GACCCCAAAA (7) 7.3 0.0073 E14.5 retina TTAATTACAA 1.8 0.0018 E14.5 retina TTGGTAATTT (4) 1.8 0.0018 E16.5 retina GACCCCAAAA (7) 27.2 0.0272 E16.5 retina TTGGTAATCT (3) 18.1 0.0181 E16.5 retina TTGGTAATTT (4) 5.4 0.0054 E16.5 retina TGGTTCCCCT (3) 3.6 0.0036 E16.5 retina GTGTACCGAA 1.8 0.0018 E16.5 retina TTAATTACAA 1.8 0.0018 E18.5 retina TTGGTAATCT (3) 41.8 0.0418 E18.5 retina GACCCCAAAA (7) 5.5 0.0055 E18.5 retina TTGGTAATTT (4) 3.6 0.0036 P0.5 retina TTGGTAATCT (3) 23.6 0.0236 P0.5 retina ACCAACCGTC (3) 3.9 0.0039 P2.5 retina TTGGTAATCT (3) 19.4 0.0194 P2.5 retina TGGTTCCCCT (3) 1.8 0.0018 P2.5 retina TTGGTAATTT (4) 1.8 0.0018 P4.5 retina TTGGTAATCT (3) 41.6 0.0416 P4.5 retina TTGGTAATTT (4) 2 0.002 P6.5 retina TTGGTAATCT (3) 30 0.03 P6.5 retina GACCCCAAAA (7) 5 0.005 P6.5 retina TGGTTCCCCT (3) 1.7 0.0017 P10.5 crx- retina TTGGTAATCT (3) 11.1 0.0111 P10.5 crx- retina ACCAACCGTC (3) 1.9 0.0019 P10.5 crx- retina GACCCCAAAA (7) 1.9 0.0019 P10.5 crx+ retina TTGGTAATCT (3) 13.5 0.0135 P10.5 crx+ retina GTGTACCGAA 1.9 0.0019 Adult retinal TTGGTAATCT (3) 7.4 0.0074 Adult retinal TTGGGTAATC (3) 3.7 0.0037 Adult retinal GACCCCAAAA (7) 1.9 0.0019 Adult retinal TGGTTCCCCT (3) 1.9 0.0019 ONL TTGGTAATCT (3) 26.8 0.0268 ONL TTGGTAATTT (4) 1.9 0.0019