Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27218
Morf4l2
mortality factor 4 like 2
X
56397
Mm.27218
R75336
expressed sequence R75336
X
97623
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 168 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
P8 Cb GC
GGATGCTGGG (
5
)
31
0.031
P8 Cb GC
ATAGAGGCAA
(
3
)
17.9
0.0179
P8 Cb GC
TTAGAACGTG
(
2
)
13.1
0.0131
P8 Cb GC
AAAAATAAAA (
20
)
8.2
0.0082
P8 Cb GC
ACAAAGGCAA (
2
)
1.6
0.0016
P8 Cb GC
GGTTTCCAGG
(
3
)
1.6
0.0016
P8 Cb GC
TGAGATATGT (
9
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
Cb medulloblastoma
AAAAATAAAA (
20
)
20.8
0.0208
Cb medulloblastoma
ATAGAGGCAA
(
3
)
18.5
0.0185
Cb medulloblastoma
GGATGCTGGG (
5
)
18.5
0.0185
Cb medulloblastoma
TTAGAACGTG
(
2
)
9.2
0.0092
Cb medulloblastoma
TGAGATATGT (
9
)
6.9
0.0069
Cb medulloblastoma
ACAAAGGCAA (
2
)
2.3
0.0023
Cb medulloblastoma
AGACTACACA (
5
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+1d culture
GGATGCTGGG (
5
)
29.7
0.0297
P8 GC+1d culture
ATAGAGGCAA
(
3
)
14.8
0.0148
P8 GC+1d culture
TTAGAACGTG
(
2
)
13.7
0.0137
P8 GC+1d culture
AAAAATAAAA (
20
)
11.4
0.0114
P8 GC+1d culture
ACAAAGGCAA (
2
)
3.4
0.0034
P8 GC+1d culture
ATATTAAAAA
(
5
)
2.3
0.0023
P8 GC+1d culture
CATTTGTGCT
(
2
)
1.1
0.0011
P8 GC+1d culture
TGAGATATGT (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
P8 GC+SHH+1d culture
GGATGCTGGG (
5
)
35.1
0.0351
P8 GC+SHH+1d culture
ATAGAGGCAA
(
3
)
21.1
0.0211
P8 GC+SHH+1d culture
TTAGAACGTG
(
2
)
16.4
0.0164
P8 GC+SHH+1d culture
AAAAATAAAA (
20
)
5.9
0.0059
P8 GC+SHH+1d culture
TGAGATATGT (
9
)
4.7
0.0047
P8 GC+SHH+1d culture
ACAAAGGCAA (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CATTTGTGCT
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GGATGCTGGG (
5
)
17.5
0.0175
3T3 fibroblasts
ATAGAGGCAA
(
3
)
10.5
0.0105
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
3T3 fibroblasts
GGTTTCCAGG
(
3
)
3.5
0.0035
3T3 fibroblasts
TTAGAACGTG
(
2
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GGATGCTGGG (
5
)
74.2
0.0742
E15 cortex
ATAGAGGCAA
(
3
)
9.9
0.0099
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
E15 cortex
TGATGCTGGG
(
4
)
9.9
0.0099
E15 cortex
CATTTGTGCT
(
2
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
P1 cortex
TTAGAACGTG
(
2
)
13.6
0.0136
P1 cortex
GGATGCTGGG (
5
)
9.1
0.0091
P1 cortex
AAAAATAAAA (
20
)
4.5
0.0045
P1 cortex
AAAGAAGCAA (
6
)
4.5
0.0045
P1 cortex
TGAGATATGT (
9
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
Hypothalamus
TTAGAACGTG
(
2
)
23.5
0.0235
Hypothalamus
AAAAATAAAA (
20
)
14.5
0.0145
Hypothalamus
ATAGAGGCAA
(
3
)
10.9
0.0109
Hypothalamus
GGATGCTGGG (
5
)
7.2
0.0072
Hypothalamus
GGTTTCCAGG
(
3
)
3.6
0.0036
Hypothalamus
TGAGATATGT (
9
)
3.6
0.0036
Hypothalamus
AGACTACACA (
5
)
1.8
0.0018
Hypothalamus
ATATTAAAAA
(
5
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GGATGCTGGG (
5
)
45.1
0.0451
E12.5 retina
ATAGAGGCAA
(
3
)
24.4
0.0244
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
TTAGAACGTG
(
2
)
11.3
0.0113
E12.5 retina
TGAGATATGT (
9
)
7.5
0.0075
E12.5 retina
ACAAAGGCAA (
2
)
3.8
0.0038
E12.5 retina
AAAAATAAAA (
20
)
1.9
0.0019
E12.5 retina
AGACTACACA (
5
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E14.5 retina
ATAGAGGCAA
(
3
)
20
0.02
E14.5 retina
GGATGCTGGG (
5
)
18.2
0.0182
E14.5 retina
AAAAATAAAA (
20
)
16.4
0.0164
E14.5 retina
TGAGATATGT (
9
)
3.6
0.0036
E14.5 retina
TTAGAACGTG
(
2
)
3.6
0.0036
E14.5 retina
AAAGAAGCAA (
6
)
1.8
0.0018
E14.5 retina
AGACTACACA (
5
)
1.8
0.0018
E14.5 retina
ATATTAAAAA
(
5
)
1.8
0.0018
E14.5 retina
CATTTGTGCT
(
2
)
1.8
0.0018
E14.5 retina
GGTTTCCAGG
(
3
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
ATAGAGGCAA
(
3
)
23.5
0.0235
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
GGATGCTGGG (
5
)
18.1
0.0181
E16.5 retina
TTAGAACGTG
(
2
)
18.1
0.0181
E16.5 retina
AAAAATAAAA (
20
)
9.1
0.0091
E16.5 retina
TGAGATATGT (
9
)
3.6
0.0036
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
E18.5 retina
GGATGCTGGG (
5
)
40
0.04
E18.5 retina
ATAGAGGCAA
(
3
)
16.4
0.0164
E18.5 retina
TTAGAACGTG
(
2
)
9.1
0.0091
E18.5 retina
AAAAATAAAA (
20
)
7.3
0.0073
E18.5 retina
TGAGATATGT (
9
)
5.5
0.0055
E18.5 retina
ACAAAGGCAA (
2
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P0.5 retina
GGATGCTGGG (
5
)
23.6
0.0236
P0.5 retina
ATAGAGGCAA
(
3
)
13.7
0.0137
P0.5 retina
TGAGATATGT (
9
)
9.8
0.0098
P0.5 retina
TTAGAACGTG
(
2
)
7.9
0.0079
P0.5 retina
AAAAATAAAA (
20
)
3.9
0.0039
P0.5 retina
ACAAAGGCAA (
2
)
2
0.002
P0.5 retina
GGTTTCCAGG
(
3
)
2
0.002
P0.5 retina
TGATGCTGGG
(
4
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
GGATGCTGGG (
5
)
42.2
0.0422
P2.5 retina
ATAGAGGCAA
(
3
)
24.6
0.0246
P2.5 retina
TTAGAACGTG
(
2
)
12.3
0.0123
P2.5 retina
ACAAAGGCAA (
2
)
3.5
0.0035
P2.5 retina
TGAGATATGT (
9
)
3.5
0.0035
P2.5 retina
AAAAATAAAA (
20
)
1.8
0.0018
P2.5 retina
TGATGCTGGG
(
4
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
ATAGAGGCAA
(
3
)
27.7
0.0277
P4.5 retina
GGATGCTGGG (
5
)
25.8
0.0258
P4.5 retina
TTAGAACGTG
(
2
)
11.9
0.0119
P4.5 retina
AAAAATAAAA (
20
)
5.9
0.0059
P4.5 retina
ACAAAGGCAA (
2
)
4
0.004
P4.5 retina
AGACTACACA (
5
)
4
0.004
P4.5 retina
TGAGATATGT (
9
)
4
0.004
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
ATAGAGGCAA
(
3
)
15
0.015
P6.5 retina
AAAAATAAAA (
20
)
13.3
0.0133
P6.5 retina
TTAGAACGTG
(
2
)
13.3
0.0133
P6.5 retina
GGATGCTGGG (
5
)
6.7
0.0067
P6.5 retina
TGAGATATGT (
9
)
5
0.005
P6.5 retina
ACAAAGGCAA (
2
)
1.7
0.0017
P6.5 retina
ATATTAAAAA
(
5
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GGATGCTGGG (
5
)
26
0.026
P10.5 crx- retina
TTAGAACGTG
(
2
)
20.4
0.0204
P10.5 crx- retina
ATAGAGGCAA
(
3
)
14.9
0.0149
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx- retina
TGAGATATGT (
9
)
3.7
0.0037
P10.5 crx- retina
AAAAATAAAA (
20
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GGATGCTGGG (
5
)
26.9
0.0269
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
ATAGAGGCAA
(
3
)
11.5
0.0115
P10.5 crx+ retina
TTAGAACGTG
(
2
)
7.7
0.0077
P10.5 crx+ retina
AAAAATAAAA (
20
)
3.8
0.0038
P10.5 crx+ retina
AAAGAAGCAA (
6
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GGATGCTGGG (
5
)
24.1
0.0241
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
Adult retinal
TTAGAACGTG
(
2
)
3.7
0.0037
Adult retinal
AAAAATAAAA (
20
)
1.9
0.0019
Adult retinal
ACAAAGGCAA (
2
)
1.9
0.0019
Adult retinal
ATAGAGGCAA
(
3
)
1.9
0.0019
Adult retinal
TGAGATATGT (
9
)
1.9
0.0019
Adult retinal
TGATGCTGGG
(
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
GGATGCTGGG (
5
)
3.8
0.0038
ONL
AAAGAAGCAA (
6
)
1.9
0.0019
ONL
ACAAAGGCAA (
2
)
1.9
0.0019
ONL
TGAGATATGT (
9
)
1.9
0.0019
