Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27252
2010001M09Rik
RIKEN cDNA 2010001M09 gene
18
69816
Gene Ontology
extracellular space
Human Homolog
PACAP[proapoptotic caspase adaptor protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGCCCAGGC (
2
)
TAGGCCAGGT
3.2
0.0032
Cb medulloblastoma
GCTTCTCCAG
TAGCCCAGGC (
2
)
TAGGCCAGGT
9.2
0.0092
P8 GC+1d culture
GCTTCTCCAG
TAGCCCAGGC (
2
)
TAGGCCAGGT
5.6
0.0056
P8 GC+SHH+1d culture
GCTTCTCCAG
TAGCCCAGGC (
2
)
TAGGCCAGGC
(
2
)
TAGGCCAGGT
21
0.021
3T3 fibroblasts
TAGCCCAGGC (
2
)
14
0.014
E15 cortex
TAGCCCAGGC (
2
)
TAGGCCAGGT
29.6
0.0296
Hypothalamus
TAGCCCAGGC (
2
)
TAGGCCAGGT
9
0.009
E12.5 retina
TAGCCCAGGC (
2
)
TAGGCCAGGT
16.9
0.0169
E14.5 retina
TAGCCCAGGC (
2
)
TAGGCCAGGT
18.3
0.0183
E16.5 retina
TAGCCCAGGC (
2
)
TAGGCCAGGT
10.8
0.0108
E18.5 retina
TAGCCCAGGC (
2
)
TAGGCCAGGT
12.8
0.0128
P0.5 retina
GCTTCTCCAG
TAGCCCAGGC (
2
)
TAGGCCAGGT
9.9
0.0099
P2.5 retina
TAGCCCAGGC (
2
)
TAGGCCAGGT
10.6
0.0106
P4.5 retina
TAGCCCAGGC (
2
)
TAGGCCAGGT
4
0.004
P6.5 retina
TAGCCCAGGC (
2
)
TAGGCCAGGC
(
2
)
TAGGCCAGGT
8.4
0.0084
P10.5 crx- retina
TAGCCCAGGC (
2
)
TAGGCCAGGT
3.8
0.0038
P10.5 crx+ retina
TAGCCCAGGC (
2
)
3.8
0.0038
Adult retinal
TAGCCCAGGC (
2
)
TAGGCCAGGC
(
2
)
3.8
0.0038
ONL
TAGCCCAGGC (
2
)
9.6
0.0096
