Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272632	Xlkd1	extra cellular link domain-containing 1	7		114332
Gene Ontology	cell adhesion | extracellular space | glycosaminoglycan catabolism | hyaluronic acid binding | hyaluronic acid binding | integral to membrane | plasma membrane | receptor activity | transmembrane receptor activity
Human Homolog	XLKD1[extracellular link domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture AATGAATGGG 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture AATGAATGGG 1.2 0.0012 P8 GC+SHH+1d culture CAGACAAACA (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTGAGAAAA (15) 1.2 0.0012 3T3 fibroblasts CAGACAAACA (3) 7 0.007 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex TAAAAAAAAA (196) 50 0.05 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GCTGAGAAAA (15) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina CAGACAAACA (3) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina AATGAATGGG 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GCTGAGAAAA (15) 3.8 0.0038 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GCTGAGAAAA (15) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287