Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272809	Ppfia1	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein, alpha 1	7		233977
Human Homolog	PPFIA1[protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCACGAGT 1.6 0.0016 Cb medulloblastoma GGCTGGTGGG (4) 25.4 0.0254 Cb medulloblastoma TGCGTATTTA 2.3 0.0023 P8 GC+1d culture GGCTGGTGGG (4) 2.3 0.0023 P8 GC+1d culture TGCGTATTTA 2.3 0.0023 P8 GC+1d culture GGGCAGGTGC (2) 1.1 0.0011 P8 GC+SHH+1d culture GGCTGGTGGG (4) 5.9 0.0059 P8 GC+SHH+1d culture GGGCAGGTGC (2) 3.5 0.0035 P8 GC+SHH+1d culture TGCGTATTTA 1.2 0.0012 3T3 fibroblasts GGCTGGTGGG (4) 10.5 0.0105 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex AACCACGAGT 4.9 0.0049 E15 cortex GACAGGAGGA (9) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGCGTATTTA 4.9 0.0049 P1 cortex ATGACTTTAT (2) 4.5 0.0045 P1 cortex GGCTGGTGGG (4) 4.5 0.0045 Hypothalamus GGCTGGTGGG (4) 14.5 0.0145 E12.5 retina GGGCAGGTGC (2) 3.8 0.0038 E14.5 retina GGCTGGTGGG (4) 1.8 0.0018 E14.5 retina TGCGTATTTA 1.8 0.0018 E16.5 retina GGCTGGTGGG (4) 1.8 0.0018 E16.5 retina TGCGTATTTA 1.8 0.0018 E18.5 retina GGCTGGTGGG (4) 3.6 0.0036 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina ATGACTTTAT (2) 2 0.002 P2.5 retina GGCTGGTGGG (4) 5.3 0.0053 P2.5 retina GGGCAGGTGC (2) 3.5 0.0035 P2.5 retina GACAGGAGGA (9) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGCGTATTTA 1.8 0.0018 P4.5 retina ATGACTTTAT (2) 2 0.002 P4.5 retina GGCTGGTGGG (4) 2 0.002 P4.5 retina GGGCAGGTGC (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AACCACGAGT 1.7 0.0017 P6.5 retina ATGACTTTAT (2) 1.7 0.0017 P6.5 retina GGCTGGTGGG (4) 1.7 0.0017 P6.5 retina GGGCAGGTGC (2) 1.7 0.0017 P10.5 crx- retina GGCTGGTGGG (4) 5.6 0.0056 P10.5 crx- retina TGCGTATTTA 5.6 0.0056 P10.5 crx+ retina GGCTGGTGGG (4) 15.4 0.0154 Adult retinal AACCACGAGT 1.9 0.0019 Adult retinal GGCTGGTGGG (4) 1.9 0.0019 Adult retinal GGGCAGGTGC (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL ATGACTTTAT (2) 1.9 0.0019 ONL GACAGGAGGA (9) 1.9 0.0019 ONL GGGCAGGTGC (2) 1.9 0.0019