Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272826	Ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	3		53975
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | helicase activity | hydrolase activity | mRNA processing | negative regulation of transcription from Pol II promoter | nucleic acid binding | nucleus | protein binding | spliceosome complex | transcriptional repressor activity | transcriptional repressor complex
Human Homolog	DDX20[DEAD (Asp-Glu-Ala-Asp) box polypeptide 20]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTTCAGAC (9) 9.8 0.0098 P8 Cb GC GCGGCGGCGG (24) 6.5 0.0065 P8 Cb GC TAGGCTGTTC (2) 3.3 0.0033 Cb medulloblastoma GCGGCGGCGG (24) 4.6 0.0046 Cb medulloblastoma TAGGCTGTTC (2) 2.3 0.0023 Cb medulloblastoma TGCTTCAGAC (9) 2.3 0.0023 P8 GC+1d culture GCGGCGGCGG (24) 4.6 0.0046 P8 GC+1d culture TGCTTCAGAC (9) 2.3 0.0023 P8 GC+SHH+1d culture GCGGCGGCGG (24) 16.4 0.0164 P8 GC+SHH+1d culture TAGGCTGTTC (2) 3.5 0.0035 P8 GC+SHH+1d culture TGCTTCAGAC (9) 2.3 0.0023 3T3 fibroblasts GCGGCGGCGG (24) 3.5 0.0035 3T3 fibroblasts TGCTTCAGAC (9) 3.5 0.0035 Hypothalamus GCGGCGGCGG (24) 7.2 0.0072 Hypothalamus TGCTTCAGAC (9) 5.4 0.0054 Hypothalamus TAGGCTGTTC (2) 3.6 0.0036 E12.5 retina GCGGCGGCGG (24) 15 0.015 E12.5 retina TGCTTCAGAC (9) 5.6 0.0056 E12.5 retina TAGGCTGTTC (2) 1.9 0.0019 E14.5 retina GCGGCGGCGG (24) 5.5 0.0055 E14.5 retina TAGGCTGTTC (2) 5.5 0.0055 E16.5 retina GCGGCGGCGG (24) 14.5 0.0145 E16.5 retina TGCTTCAGAC (9) 1.8 0.0018 E18.5 retina GCGGCGGCGG (24) 9.1 0.0091 E18.5 retina TAGGCTGTTC (2) 5.5 0.0055 P0.5 retina GCGGCGGCGG (24) 7.9 0.0079 P0.5 retina TAGGCTGTTC (2) 3.9 0.0039 P0.5 retina TGCTTCAGAC (9) 3.9 0.0039 P2.5 retina GCGGCGGCGG (24) 7 0.007 P2.5 retina TAGGCTGTTC (2) 3.5 0.0035 P4.5 retina TAGGCTGTTC (2) 9.9 0.0099 P4.5 retina GCGGCGGCGG (24) 4 0.004 P4.5 retina TGCTTCAGAC (9) 2 0.002 P6.5 retina TAGGCTGTTC (2) 6.7 0.0067 P6.5 retina GCGGCGGCGG (24) 5 0.005 P6.5 retina TGCTTCAGAC (9) 1.7 0.0017 P10.5 crx- retina TGCTTCAGAC (9) 5.6 0.0056 P10.5 crx- retina TAGGCTGTTC (2) 3.7 0.0037 P10.5 crx- retina GCGGCGGCGG (24) 1.9 0.0019 P10.5 crx+ retina GCGGCGGCGG (24) 15.4 0.0154 P10.5 crx+ retina TAGGCTGTTC (2) 7.7 0.0077 P10.5 crx+ retina TGCTTCAGAC (9) 1.9 0.0019 Adult retinal GCGGCGGCGG (24) 16.7 0.0167 Adult retinal TAGGCTGTTC (2) 5.6 0.0056 Adult retinal TGCTTCAGAC (9) 1.9 0.0019 ONL GCGGCGGCGG (24) 9.6 0.0096 ONL TAGGCTGTTC (2) 1.9 0.0019 ONL TGCTTCAGAC (9) 1.9 0.0019